| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2048 |
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| Symbol | |
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| ID | 6409708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2218811 |
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| End bp | 2220217 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711934 |
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| Product | hypothetical protein |
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| Protein accession | YP_001991046 |
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| Protein GI | 192290441 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.131938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCA GCTCTCACGT TCAAACGGTG CTTGCCCGCG CCGATGCCGA TTTCGACTCT
GCGCTGCAGC GGCTGTTCGC GCTGCTGCGG ATCAAGTCGA TCTCGGCCGA TCCGGCGTTC
GCGGCGGACT GCAAGGCGGC GGCTGAGCAC CTTGCCGTCG ACATCGCGTC GATCGGATTT
GACGCCGAGG TGAGGCCGAC GGCCGGTCAT CCGGCGATCG TGGCGAAGGC CAAGAGCAAC
ACCGGCAACC GGCCGCACGC GCTGTTCTAT GGCCACTATG ACGTGCAGCC GGTCGATCCC
TTGGAGCTGT GGCACCGGCC GCCGTTCGAG CCGGTGATCG CGGACCATGC CGACGGCCGC
AAGATCATCG TGGCGCGCGG CGCGCAGGAC GACAAAGGCC AGCTCTCGAC TTTCATCGAA
GCCTGCCGTG CTTGGAAGGA CGCGACCGGC GAACTGCCGA TCGATCTGAC CATCGTGATC
GAGGGCGAAG AAGAAGTCGG TTCGAAGAAC TTCGTGCCGT TCCTCGACGC GCATAAGAAG
GATCTCGCTG CCGATTTCGC GCTGGTCTGC GACACCGGGA TGTGGGACCG GGCGACGCCG
GCGATCACCA CCTCGCTGCG CGGCCTCGTC TATGAAGAGG TGAAGATCAA GGCGGCGAAC
CGCGATCTGC ATTCCGGCGT GTACGGCGGC GGCGCGCAGA ATCCGATCCG GGTGCTGACG
CGGATTCTTG GCGGCCTGCA CGACGAGCAC GGCCGTATTA CCATTCCGGG CTTCTACGAC
GGCGTGAAAG ATCTGCCGCC GGAGATTTTG GCGCAGTGGA AGGGGCTGAA CCTGACCGCC
GAGAGCTTTC TCGGCCCGAT CGGGCTGTCG ATCCCCGCCG GTGAGGACGA TCGCCTGCTG
ATCGAGCAAC TGATCTCGCG GCCGACCTGC GACATCAACG GCATCGTCGG CGGTTACACC
GGCGAGGGAT CGAAAACGGT GATCGCGGCA GAGGCCTCGG CCAAGGTGTC GTTCCGCATC
GTCGAAGGGC AGGACCCGAA CAAGATCCGC GATGCGTTCC GCGCTTATGT CACCGCCCGG
CTGCCGGGCG ATTGCCGCGC CGAATTCCTC GATCACTCCA ACGGGGCAGC GATCGCGCTG
CCGTGGGACA TGAAGCCGCT GACCGCGGCG AGCCGCGCAC TGACCGAGGA GTGGGGCAAG
GAGGCCGTGC TGATCGGCTC GGGCGCATCG ATTCCGATCG TCGCCGATTT CAAGCGCACG
CTCGGCCTCG ATAGCGTGCT GATCGGCTTC GGTCTCGACG ACGACAACAT CCATTCGCCG
AACGAAAAGT ACAACCTCAC CAGCTTCCAG AAGGGCATCC GTTCATGGGT GCGGATTCTC
GGTGCGCTGG CTGACGCACC GCGCTGA
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| Protein sequence | MSASSHVQTV LARADADFDS ALQRLFALLR IKSISADPAF AADCKAAAEH LAVDIASIGF
DAEVRPTAGH PAIVAKAKSN TGNRPHALFY GHYDVQPVDP LELWHRPPFE PVIADHADGR
KIIVARGAQD DKGQLSTFIE ACRAWKDATG ELPIDLTIVI EGEEEVGSKN FVPFLDAHKK
DLAADFALVC DTGMWDRATP AITTSLRGLV YEEVKIKAAN RDLHSGVYGG GAQNPIRVLT
RILGGLHDEH GRITIPGFYD GVKDLPPEIL AQWKGLNLTA ESFLGPIGLS IPAGEDDRLL
IEQLISRPTC DINGIVGGYT GEGSKTVIAA EASAKVSFRI VEGQDPNKIR DAFRAYVTAR
LPGDCRAEFL DHSNGAAIAL PWDMKPLTAA SRALTEEWGK EAVLIGSGAS IPIVADFKRT
LGLDSVLIGF GLDDDNIHSP NEKYNLTSFQ KGIRSWVRIL GALADAPR
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