| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2044 |
|---|
| Symbol | |
|---|
| ID | 6409704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2214850 |
|---|
| End bp | 2215707 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642711930 |
|---|
| Product | dihydropteroate synthase |
|---|
| Protein accession | YP_001991042 |
|---|
| Protein GI | 192290437 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCT CCCCTTCGCT GCCCGCATCG CCCGCCGCTC CGGCCAAGCC GTCACAGCAG
CGCGATCTGC TGGTGCGTCC CGCCGCGGCG GTGATGGGCA TTCTCAACGT CACACCGGAT
TCTTTCTCTG ACGGCGGCGA TTATCTCGCC CCCGAGCAGG CCTGCGCCCA TGCGGCCGAG
ATGATCGCCG ATGGCGCCGA GATCATCGAC ATCGGTGCGG AGTCCACCCG CCCCTACGGC
TCGCAGCCGG TGTCCGCCGC TGAAGAGCTG CGGCGGCTGC AGCCCGTGCT GGAAGCGGTG
GTGGCGCTCG GCACGCCGGT GTCGATCGAC ACCATGAAGG CCGACGTCGC CGCCTGGGCA
CTCGACCATG GTGCCGCGAT CGCCAACGAC GTGTGGGGAT TGCAGCGCGA TCCGGAGATG
GCGGGCGTGA TTGCAGCGCG CCGCGCCCCG GTGATCGTGA TGCACAATCG CGACGCGGCC
GATCCAGCCA TCGACATCGT CGCCGACATC AACGCGTTCT TCGAACGTTC GATGACGATC
GCCACGAAGG CCGGGATCGC CGAGGAGCTG ATCGTGCTCG ATCCCGGCAT CGGCTTCGGC
AAGACGCCGC AGCAGAGCAT GATCACGCTG GCGCGGCTGC GCGAGTTCGC AAGCTTCGGC
CGCCCGCTGC TGGTCGGCGC CTCGCGCAAG CGCTTCATTA GTACGGTGGT GCCGAGCGAG
CCGAAGCAGC GGCTCGGCGG TTCGCTCGCC GCGCATCTCA TCGCGGTCGA GAACGGCGCC
AAGATCATCC GCGCGCACGA CGTCGCCGCG ACGTCGCAGG CATTGAAAGT CGCCCACGCC
ATCAGGGACA GCCGATGA
|
|---|
| Protein sequence | MTASPSLPAS PAAPAKPSQQ RDLLVRPAAA VMGILNVTPD SFSDGGDYLA PEQACAHAAE
MIADGAEIID IGAESTRPYG SQPVSAAEEL RRLQPVLEAV VALGTPVSID TMKADVAAWA
LDHGAAIAND VWGLQRDPEM AGVIAARRAP VIVMHNRDAA DPAIDIVADI NAFFERSMTI
ATKAGIAEEL IVLDPGIGFG KTPQQSMITL ARLREFASFG RPLLVGASRK RFISTVVPSE
PKQRLGGSLA AHLIAVENGA KIIRAHDVAA TSQALKVAHA IRDSR
|
|---|
| |