| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2041 |
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| Symbol | |
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| ID | 6409701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2211966 |
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| End bp | 2213837 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711927 |
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| Product | Methylmalonyl-CoA mutase |
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| Protein accession | YP_001991039 |
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| Protein GI | 192290434 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTG CAAACCAAGA GCTGCGGCTC GCCGCCGATT TCGCCCCGGC CGGCTATGAG
GACTGGCGCA AGCTGGTCGA CGGCGTGCTG AAGGGCGCAC CGTTCGAGAA GCTGATCAGC
AAGAGCTACG ACGGCATCCA GATCGATCCG ATCTACGTGC GGGCGCGCGA CGCCGCACCG
ATCGCCGGCC GTGCTCCCGC GGCGCCATGG CGGATCATGC AGCGGGTCGA TCACCCCGAG
CCAAAGGAAG CCAACAAGCA GGCCCTGCAG GACCTCGAAA ACGGCGCCAC CGGCCTGACG
CTGGTGTTCG CAGGCAGCGT CGGCGCGCGC GGCTTCGGTC TGCCCGCCAC GCAGGAAGCC
ATCGCGCAGG TGCTGGAGGG TGTCCACCTC GACGCCGGCA TCGCAATCGA ACTGCAGTTC
CCGCCGCAGT CCTGTGACGT GGTCCGCCAC CTCGCCGACC TGATCAAGAG CCGCGGCACC
GACCCGGCAG CCTGCGATAT CCGCTTCGGC ATCGATCCGC TCGGCGCGCG CGCTGTGCAA
GGATCGAGCG CCACCGACTG GAGCGAGATC GCCAAGGGCC TCGGCGACGT CGCCGCCGGC
CTCGCCAGCA CCGGGTTCAA GGGCCCGTTC CTGGTCGCCG ACGGCCGCGT GATCCACGAT
GCTGGCGGTT CGGAGGCCCA GGAGCTGGCT TACGTGCTCG GCTGCAGCGT CGCCTATCTG
CGGGCGCTGG AGGCCGCCGG CGTGTCTCCC GAAGCCGCCC GCGGCATGAT CTACGCGCGG
CTGTCGGCGG ACGCCGATCA ATTCCTCACC CTGTCGAAGT TCCGCGCGCT GCGTCTCTTG
TGGGCGCGGA TCGAGCAAGC CTGCGGCGTG ACGCCGAAGC CGCTCTTCGT CGCCGCCGAG
ACCGCGTGGC GGATGCTGAC CCAGCGCGAC CCTTACGTGA ACATGCTGCG CGCCACGATG
GCGACGTTCG CCGCCGCACT CGGCGGGGCT AACTCGGTGC AGGTGCTGCC GCACACGCTG
GCGCTCGGCC TGCCAGATAG CTTCGCGCGA CGCGTCGCTC GCAACACGCA GTTGATCCTG
CTGGAAGAGT CCAACCTCGA CAAGGTCGCC GATCCGGCTG CCGGTGCCGG CGGCATCGAA
GCGCTGACCA AGGAGCTGTG CGACGCCGCC TGGTCCCAGT TCCAGGAGAT CGAGCGCGCC
GGCGGCGCGC TCGCCGCGCT GCAGGCCGGG CTGATCCAGC CGAAGGTTGC GGCGAGCCGC
GCCGCTCGCG ACAAGGCGAT AGCCAAACGC CGCGACGTTC TGACCGGCGC CTCCGAGTTC
CCGAACCTGC ACGAGGCACA GGCCAAGGTG CTCGACGTCA AGCCAGCCGC GGTACCGCCC
GCCGGTGAGG CGAAGATCAG CTTCACGGCG CTGACGCCGA TCCGCGTTGC GACGCCGTTC
GAGACCCTGC GCGACAAGTC CGATGCGGTG CTCGCCGCCA AGGCGTCGCG GCCCAAGGTG
TTCCTCGCCA ATCTCGGCAC GCCGGCCGAC TTCACCGCGC GCGCCACTTT CGCCAAGAGC
TTCTTCGAGA CCGGCGGCAT CGAGGCGATC GACAGCGAAG GCTTCACCGA TGCGGCTGCG
CTCGCCGACG CCTTCAAGGC GTCCGGTGCG GCGTTCGCGT GCCTGTGCTC GTCCGACAAG
GCCTACCCGG CCTATGCGGC CCCGGCCGCC CAGGCGCTGC GCGCCGCGGG CGCAAAGCGG
ATCTATCTGG CCGGCCGCCC CGGCGAGCAG GAGAGCGCGC TGCGCGAAGC CGGTGTGCAG
GAGTTCGTGT TCGCCGGCGG CGACGCGCTG GCGACGCTCA GTGACGCCTG GAAGGGCATC
GAAGCGGCAT GA
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| Protein sequence | MSSANQELRL AADFAPAGYE DWRKLVDGVL KGAPFEKLIS KSYDGIQIDP IYVRARDAAP
IAGRAPAAPW RIMQRVDHPE PKEANKQALQ DLENGATGLT LVFAGSVGAR GFGLPATQEA
IAQVLEGVHL DAGIAIELQF PPQSCDVVRH LADLIKSRGT DPAACDIRFG IDPLGARAVQ
GSSATDWSEI AKGLGDVAAG LASTGFKGPF LVADGRVIHD AGGSEAQELA YVLGCSVAYL
RALEAAGVSP EAARGMIYAR LSADADQFLT LSKFRALRLL WARIEQACGV TPKPLFVAAE
TAWRMLTQRD PYVNMLRATM ATFAAALGGA NSVQVLPHTL ALGLPDSFAR RVARNTQLIL
LEESNLDKVA DPAAGAGGIE ALTKELCDAA WSQFQEIERA GGALAALQAG LIQPKVAASR
AARDKAIAKR RDVLTGASEF PNLHEAQAKV LDVKPAAVPP AGEAKISFTA LTPIRVATPF
ETLRDKSDAV LAAKASRPKV FLANLGTPAD FTARATFAKS FFETGGIEAI DSEGFTDAAA
LADAFKASGA AFACLCSSDK AYPAYAAPAA QALRAAGAKR IYLAGRPGEQ ESALREAGVQ
EFVFAGGDAL ATLSDAWKGI EAA
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