Gene Rpal_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2014 
Symbol 
ID6409674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2185812 
End bp2186591 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content64% 
IMG OID642711900 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001991012 
Protein GI192290407 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.162316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAT TCGAATTCAT CATCGTCGAG CGTCAAAACG CGGTCGGCAT CATCAAGCTC 
AACCGCCCGA AGATGCTGAA TGCGCTGTCG TTCGGCGTGT TTCGTGAGAT CGGCGCGGCG
GTCGAGGATC TCGAGGCTGA CGATGCGATC GGATGCATCC TGATCACCGG CAGCGAGAAG
GCGTTCGCCG CCGGCGCCGA CATCAAGGAG ATGCAGCCGA AGGGCTTCAT CGACATGTTC
AACGAGGACT TCACTTCGAT CGGCGGTGAC CGGCTCGCGC GCTGCCGCAA GCCGACCGTC
GCCGCGGTCG CCGGCTACGC GCTCGGCGGC GGCTGCGAAT TGGCAATGAT GTGCGACATC
ATTATCGCCG CCGACACCGC CAAGTTCGGT CAACCGGAAA TCACGCTGGG CACCATTCCG
GGCATCGGCG GCACCCAGCG TCTCACCCGC GCTATCGGCA AGTACAAGGC GATGGACCTG
TGCCTCACCG GACGGATGAT GGACGCGCAG GAAGCCGAAC GCTCGGGCCT GGTCAGCCGC
ATCGTGCCGG CCGACAAGCT GATGGAAGAA GCGCTCGGCG CCGCCGAAAA GATTGCCACG
ATGTCGCGCC CCACCGCAGC GATGGCCAAA AGCGCGGTGA ACCGGGCGCT GGAAACTACG
CTCGCCGAAG GTCTCGCCGT CGAGCGCGAC CTGTTCCGAT CGACCTTCGC GCTGGAAGAC
CGCGCCGAGG GCATGGCGGC GTTCATCGAA AAGCGCAAGC CGAACAACCA GAACCGCTGA
 
Protein sequence
MSTFEFIIVE RQNAVGIIKL NRPKMLNALS FGVFREIGAA VEDLEADDAI GCILITGSEK 
AFAAGADIKE MQPKGFIDMF NEDFTSIGGD RLARCRKPTV AAVAGYALGG GCELAMMCDI
IIAADTAKFG QPEITLGTIP GIGGTQRLTR AIGKYKAMDL CLTGRMMDAQ EAERSGLVSR
IVPADKLMEE ALGAAEKIAT MSRPTAAMAK SAVNRALETT LAEGLAVERD LFRSTFALED
RAEGMAAFIE KRKPNNQNR