Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2014 |
Symbol | |
ID | 6409674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2185812 |
End bp | 2186591 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642711900 |
Product | Enoyl-CoA hydratase/isomerase |
Protein accession | YP_001991012 |
Protein GI | 192290407 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.162316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAT TCGAATTCAT CATCGTCGAG CGTCAAAACG CGGTCGGCAT CATCAAGCTC AACCGCCCGA AGATGCTGAA TGCGCTGTCG TTCGGCGTGT TTCGTGAGAT CGGCGCGGCG GTCGAGGATC TCGAGGCTGA CGATGCGATC GGATGCATCC TGATCACCGG CAGCGAGAAG GCGTTCGCCG CCGGCGCCGA CATCAAGGAG ATGCAGCCGA AGGGCTTCAT CGACATGTTC AACGAGGACT TCACTTCGAT CGGCGGTGAC CGGCTCGCGC GCTGCCGCAA GCCGACCGTC GCCGCGGTCG CCGGCTACGC GCTCGGCGGC GGCTGCGAAT TGGCAATGAT GTGCGACATC ATTATCGCCG CCGACACCGC CAAGTTCGGT CAACCGGAAA TCACGCTGGG CACCATTCCG GGCATCGGCG GCACCCAGCG TCTCACCCGC GCTATCGGCA AGTACAAGGC GATGGACCTG TGCCTCACCG GACGGATGAT GGACGCGCAG GAAGCCGAAC GCTCGGGCCT GGTCAGCCGC ATCGTGCCGG CCGACAAGCT GATGGAAGAA GCGCTCGGCG CCGCCGAAAA GATTGCCACG ATGTCGCGCC CCACCGCAGC GATGGCCAAA AGCGCGGTGA ACCGGGCGCT GGAAACTACG CTCGCCGAAG GTCTCGCCGT CGAGCGCGAC CTGTTCCGAT CGACCTTCGC GCTGGAAGAC CGCGCCGAGG GCATGGCGGC GTTCATCGAA AAGCGCAAGC CGAACAACCA GAACCGCTGA
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Protein sequence | MSTFEFIIVE RQNAVGIIKL NRPKMLNALS FGVFREIGAA VEDLEADDAI GCILITGSEK AFAAGADIKE MQPKGFIDMF NEDFTSIGGD RLARCRKPTV AAVAGYALGG GCELAMMCDI IIAADTAKFG QPEITLGTIP GIGGTQRLTR AIGKYKAMDL CLTGRMMDAQ EAERSGLVSR IVPADKLMEE ALGAAEKIAT MSRPTAAMAK SAVNRALETT LAEGLAVERD LFRSTFALED RAEGMAAFIE KRKPNNQNR
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