| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2010 |
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| Symbol | |
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| ID | 6409670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2179064 |
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| End bp | 2180302 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711896 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001991008 |
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| Protein GI | 192290403 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.2279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGAAC ATTTTCTTCG AAATCTGCGT CTTCGGCGCA CCTGGTGGAT CGCGGCTGCG
TGCGTTGCGG CCGGCGTTGC TGTGGGTGGT TACGAGCTGG CAAAGTTCGA GCAACCCGGT
CGTGGCCACA CCGATATTTC CAGCCAGTCG CGCCGCAGTG CCGACCGCTA CACCCCGACT
CCGGCAGAAT GGGCCAGCCT GACGATCGAG CCGGTCAGTG ACCGCAGCTT CCGCGCCGAG
CACGTCACCG AAGGCAAGAT CGCGATCGAC GAAGACCGCG CCACCCCGGT GTTCTCGCCC
TATGCGGGCC GCGTGACCAA GCTGCTGGCG CGCCCCGGTG ACCACGTCAC CAAGGGTCAG
CCGCTGTTCT CGATCGAAGC GCCGGACACC GTCCAGGCCC AGAACGATTT CATCACCGCT
TCGACCGCGC TCAACAAGGC GAAGTCGCAG CTCGATCTGG CGCAGCTTCA GGACAAACGG
GCCCGCGATC TGTTCGAAGG CAAGGCGGTG CCGCTGAAGG ACTATCAGCA GGCCCAGGCC
ACGCTGATCA CCGCGCAGAA CGATTTCCAG TCGGCCACCA CAGCGCTCGA GGCCGCGCGG
AACAGGCTGC GTATTCTCGG CCTGAGCGAG TCCGCGATCT CTGCCTTCCA GAACAAAGGC
AATATCAATC CCGAGACCAC CATCGTGGCG CCGATCGCGG GCACCGTGGT TCAGCGCAAG
GTCGGTCCGG GCCAATATGT CAACGCCGGC TCCAGCGATC CCGTCTACAT GATCGGCGAT
CTGTCGACGG TGTGGCTGAC CGCCTTCGTC CGCGAAAGCG AAGCCGCCGA TGTTGCTGAA
GGCCAGGACA TCAGCTTCAA GGTGTTGGCG CTGCCGGGCC GCACGCTGAC GGGCCGAATC
GACTACGTCT CCGCGGCGAT TGACCCGACC ACCCGCCGGC TGACGGTGCG CGCCACCATC
GACAATCCTG GCGGGCTGCT GAAGCCGGAG ATGTTCGCCA ACGTCACGAT CTACTCGCCG
TCGGATCATC CGGCCGTCGG CGTGCCACGC CAGGCGCTCA TCTACGAAGG TGACCAGGTC
CGCGTCTGGG TCGCGCATGA CGACCGCTCG ATCGAGCTGC GCACGGTGAA GCCGGGCCTG
TCGGCCGGCG ATCTGGTCGA AGTCACCGGC AACCTGCGTC CGGGCGAAAA GGTCATCACC
CGGGGCAGCC TGTTCATTGA TCGGGCTGCC ACCGGGTAA
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| Protein sequence | MREHFLRNLR LRRTWWIAAA CVAAGVAVGG YELAKFEQPG RGHTDISSQS RRSADRYTPT
PAEWASLTIE PVSDRSFRAE HVTEGKIAID EDRATPVFSP YAGRVTKLLA RPGDHVTKGQ
PLFSIEAPDT VQAQNDFITA STALNKAKSQ LDLAQLQDKR ARDLFEGKAV PLKDYQQAQA
TLITAQNDFQ SATTALEAAR NRLRILGLSE SAISAFQNKG NINPETTIVA PIAGTVVQRK
VGPGQYVNAG SSDPVYMIGD LSTVWLTAFV RESEAADVAE GQDISFKVLA LPGRTLTGRI
DYVSAAIDPT TRRLTVRATI DNPGGLLKPE MFANVTIYSP SDHPAVGVPR QALIYEGDQV
RVWVAHDDRS IELRTVKPGL SAGDLVEVTG NLRPGEKVIT RGSLFIDRAA TG
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