| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2004 |
|---|
| Symbol | |
|---|
| ID | 6409664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2169399 |
|---|
| End bp | 2170184 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642711890 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001991002 |
|---|
| Protein GI | 192290397 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4544] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGCG CCCGCCACGG CATGCTTGCG CGCCTGCAGG GCGAAATCGA CCGGCTCGAA
AGCGGGACGG CGGAGACGCT GCGCCGCGTG CCGCTCGGCC ATGACGGCGC GGATGCGGTG
CTGCATGGCG GCCTGATGCA GGGCGCGCTG CACGAAGTGT TCTGCGATGG CCGTCACGCC
GCCGCGGCGA CCGGATTCAT TGCCGGCGTG GCGCAGCTGC TCGCCGAGGC GCGCTATCTG
TTGTGGATCC GCCAGGATTT TTCCGCGCGC GAGAACGGCG AATTGGCGAT GGAGGGGCTG
GCCGAACTCG GCTTCGACCC GCGCCGTCTA GTGATGGTGC GCGCCCATGA TGCTGACAGC
GCGCTTCGCG CCGCCGCCGA TGCGCTGGCC TGCAACGGGC TCGGCGCGGT GATCACCGAG
CTGTGGGGCG AGACTCGCGC GTTCGATTCC GTCGCCTCGC GAAAACTGAC GCTGGCGGCG
CAGCAGTCCG GCGTCACCGC GCTGATGCTG CGGATCGCCG CTGCGCCGCA GGCTTCGACC
GCGGAAACCC GCTGGGTGAT CCGCGGGGCG CCTTCGCCGC CGATCGAAGA CTGGGGCGCC
CCGGTGCTCG AAACCTCTCT TGTTCGCAAT CGTCGCGGCC AGACCGGCCG CTGGATCATG
GAATGGAATT GTGATGCGTG CCGCTTCCGT GAACCGCAGA CGCATCCTCG GTCTTTGGCT
GCCGAGGCTT TCGACCGATC GAGTCGAACG AGCCTCGCCG CAGGCGAGCA CCGGCTCGCC
GGCTGA
|
|---|
| Protein sequence | MDSARHGMLA RLQGEIDRLE SGTAETLRRV PLGHDGADAV LHGGLMQGAL HEVFCDGRHA
AAATGFIAGV AQLLAEARYL LWIRQDFSAR ENGELAMEGL AELGFDPRRL VMVRAHDADS
ALRAAADALA CNGLGAVITE LWGETRAFDS VASRKLTLAA QQSGVTALML RIAAAPQAST
AETRWVIRGA PSPPIEDWGA PVLETSLVRN RRGQTGRWIM EWNCDACRFR EPQTHPRSLA
AEAFDRSSRT SLAAGEHRLA G
|
|---|
| |