| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1997 |
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| Symbol | |
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| ID | 6409657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2159141 |
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| End bp | 2160871 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711883 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001990995 |
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| Protein GI | 192290390 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGAAC TGATTGGCGA TATCACGCTG AGCATCCTGT TCGCCTGGCT GCTCGGACTG
GCGGCGCATT TTTTCCGTCA GCCATTGATC CTCGCCTACC TTATCGGCGG TTTCGTCATC
GGTCCATTCG GCCTTGGCTG GGTGAAATCC GAGAACTCGA TCTCGGTGAT CTCCGAGCTC
GGGCTGATCT TCATGCTGTT CATGATCGGT CTCGAGATCG ATCTGAAGAA GATCATCCGG
GCTGGTCCCG TTATCCTGGT GGCGGCCGGC GGACAGATCG CCGGCGGCGT GCTGCTCGGC
CTCGCCTTCT TCGTCGGCAT CGGCCTTAGT CTCGGCGGCG GCCATTTTGA CGCGCTGTAT
CTGACGGTGG CGTGCGCGCT GTCCTCCACC GTGATCATCG TCAAGGTGCT GTACGAGAAG
CGCGAGCTCG ACACCCTGCC CGGCCGCATC ACGCTCGGCA TCCTGGTGCT GCAGGACATC
TTCGCGATCC TGTTCTTGGC GGTGCAGCCA AGTCTCGCCG ACCTGCAGAT CTCGGTGCTG
CTGCTGTCGA TCGCGCGGGT CGTCGCGCTG GTCGCCACTG CGCTGGCGCT GTCGCGCTAC
GTGCTGCCCT GGCTGTTTCA CCGCATTGCC CGCACGCCCG AACTGGTGCT TCTCGGCGCA
TTGGCGTGGT GCTTCCTGAT CGGCGAAATC GCCGAGCGGC TGCATCTGTC GCGCGAGATG
GGCGCACTGG TCGCCGGCGT GTCGCTGTCG ACCTTCCCCT ACGCGCTCGA CGTCACCGCC
AAGGTGACGA CGCTGCGGGA CTTCTTCATC ACGCTGTTCT TCGTCGCGCT CGGCATGACG
ATCCCGATCC CGAACGGCTC GGTGATCGGA CTGGCGCTGG CGATCGCGGT ATTCACGCTG
GCGAGCCGGC TGCTCACCAC CTTCCTGCCG CTGTATCTGA TGAAGCAGGG CCTGCGTGCC
AGCCTGCTGC CGGCGCTGAA CCTGGCGCAG ATCAGCGAGT TCTCGCTGGT GGTGATCCAG
ACCGGCGTCG CCGCCGGACA TATCGGCACC CAGACCGCGA GCGCGGCGTC GTTCGCTTTC
GTGCTCCTGG CGGTGCTGTC GACCTTCGTG ATCATGCGCA GCGATCCGAT CACCCGCCGC
GCGATCGGGA CACTGACCAA ATTCGGCTTC CGTGATCTCG GCCAGCAGCA GAGCGGCGCC
GAGGCCGCCG CCGAGGCTGG CCATGGCGCG GTGCATCGCA TCGTGATCCT GGGCTTCTTC
CGCGCCGCCA GCGCGCTGGT CAGCGAGATC GAGCAGCACA CCCCGGAGCT GCTCAAGCAG
ATCAGCGTGA TCGACTTCAA CCCGATGGTG TATCGCACCC TCACCGAGCG TGGCATGCAC
GTGATCTACG GCGATATCAG CAACGTCGAC ACGCTGCTGC ACGCCGGCGT CGCCAAGGCC
GAGATCATCA TTCTCAGCGT GCCGGACTCG CTGCTGAAGG GCGCCACCAA CGAACGGCTG
GTGCGCCACG TCCGCGCGCT CAATCCCAAC GCACAGATCG TCGCAACCGC CGACCTGCTC
GCCGATGTCG AGGCGATGTA TCAGGCGGGT GCGGACTACG TCACCGTCAC CCGGCTGGCC
GACGCCCGCG AGCTGTTCGA AGTGATCGAA GCCGCCGACA ATGGCCTGCT GTCCGATAAG
CGCGCCGCCC TCGACGCCCG TCTCGCCGAG CGCCGGGAAG TATTGCCGTA A
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| Protein sequence | MHELIGDITL SILFAWLLGL AAHFFRQPLI LAYLIGGFVI GPFGLGWVKS ENSISVISEL
GLIFMLFMIG LEIDLKKIIR AGPVILVAAG GQIAGGVLLG LAFFVGIGLS LGGGHFDALY
LTVACALSST VIIVKVLYEK RELDTLPGRI TLGILVLQDI FAILFLAVQP SLADLQISVL
LLSIARVVAL VATALALSRY VLPWLFHRIA RTPELVLLGA LAWCFLIGEI AERLHLSREM
GALVAGVSLS TFPYALDVTA KVTTLRDFFI TLFFVALGMT IPIPNGSVIG LALAIAVFTL
ASRLLTTFLP LYLMKQGLRA SLLPALNLAQ ISEFSLVVIQ TGVAAGHIGT QTASAASFAF
VLLAVLSTFV IMRSDPITRR AIGTLTKFGF RDLGQQQSGA EAAAEAGHGA VHRIVILGFF
RAASALVSEI EQHTPELLKQ ISVIDFNPMV YRTLTERGMH VIYGDISNVD TLLHAGVAKA
EIIILSVPDS LLKGATNERL VRHVRALNPN AQIVATADLL ADVEAMYQAG ADYVTVTRLA
DARELFEVIE AADNGLLSDK RAALDARLAE RREVLP
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