Gene Rpal_1996 details

Gene Information

• Locus tag: Rpal_1996
• ID: 6409656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2158486
• End bp: 2159004
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642711882
• Product: transcriptional regulator, MarR family
• Protein accession: YP_001990994
• Protein GI: 192290389
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCAT CGAAAACCGC CGCCGTCGCC AAGCCGACGC GAGCCGGGCG CAAGGCGCCG 
GCGGTCGAGA CAGCCCCCGA GGCCTCCGAG CTGAAGATGG GCGAGCTGTC GGAGCTGCTC 
GGCTACGCGC TGAAGCGCGC GCAGCTCCGT GTGTTCGAAG ACTTCCTGCA TTGCGTCGCC 
CCGGTGCAGC TCACCCCGGC GCAGTTCTCG GTGCTGCTGT TGCTCGACGC CAATCCCGGC 
CGCAATCAGA CCGAGATCGC TACCACGCTC GGCATCCTGC GTCCGAACTT CGTCGCGATG 
CTCGATGCGC TGGAAGGTCG CGGCCTGTGC GTGCGCACCC GATCGCCGAG CGACCGTCGC 
TCGCACATCC TGATGCTCAC CGACAAGGGC CGCGCCACAC TGGCGCGCGC CAAGAAGCTG 
GTGGCGACCC GCCACGAAGA CCGGCTGACC GAACTGCTCG GCCGCGACAA TCGGGACGCT 
TTGCTGTCGA TGCTCGCGAC CATCGCCCGC GAGTTCTGA 

 

Protein sequence

MTASKTAAVA KPTRAGRKAP AVETAPEASE LKMGELSELL GYALKRAQLR VFEDFLHCVA 
PVQLTPAQFS VLLLLDANPG RNQTEIATTL GILRPNFVAM LDALEGRGLC VRTRSPSDRR 
SHILMLTDKG RATLARAKKL VATRHEDRLT ELLGRDNRDA LLSMLATIAR EF