| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1994 |
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| Symbol | |
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| ID | 6409654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2155503 |
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| End bp | 2157275 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711880 |
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| Product | ABC transporter related |
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| Protein accession | YP_001990992 |
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| Protein GI | 192290387 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGTT GGCTGCCAAT TCTCCTGTTC GCCGCCGTGA TGACGGCGCT GCCGCTGATT
CCGGGCATTC CGCCGTTCTG GATCGTGCTG CTCGACAATA TCGGCCTCGC CGCGCTGGTG
GCGATGGGCC TGGTGCTGCT CACCGGCGTC GGCGGGCTCA CCTCGTTCGG CCAGGCCGCA
TTCTGCGGCT TCGGCGCCTA CACCACCGCC TACATCACCA CGGTTTATGG CCTGTCGCCA
TGGCTGGCGC TGCCGGCTTC GCTTGCAGTC GCCGGCATCG CCGCGGTGCT CCTCGGGCTG
ATGACAGTGC GGCTGTCCGG CCACTATCTG CCGCTCGGCA CTATCGCCTG GGGCATCGCG
CTGTACTACC TGTTCAGCAA GCTCGACTTC CTCGGCCGCA ACGACGGCAT CTCAAGGGTG
CCGCCGCTGT CGATCGGCCC GATCGACATG TACGATCCGC ATACGATCTA TTTCGTGATC
TGGGCGATGG TACTGATCAG CGCGGTGCTG ACGATGAACC TGCTCGACAG CCGCACCGGC
CGCGCCATCC GCGCGCTGCG CCGCGGCCAT GTCGCCGCCG AAGCCTTCGG CGTGCAGACC
GCGCGGGCCA AGCTGCTCGT CTTCATCTAC GCCGCGGTGC TCGCCGGCCT GTCCGGCTGG
CTGTACGCGC ATTTCCAACG CAACGTGAAC CCGACGCCGT TCGGTCCGCA GGCCGGCATC
GAGTATCTGT TCATCGCCGT GGTCGGCGGC GCCGGCTATG TCTGGGGCGG CGTGCTTGGC
GCCGCGATCG TCATCATCCT GAAGGAAGTG CTGCAGGGCT ATCTGCCGCT GCTGTTCGGC
GGCCAGGGCC AGCTCGAGAT CATCGTGTTC GGCATCCTCT TGGTGGTGCT GCTGCAGCTC
GCGCCCGGCG GCGTCTGGCC CTGGCTCGCC AATCTGGTGC CGCTGAAATT CCGGCGTGCC
GTCACCGGCA ATGCCGGTGG CCTGCCCGCG CGCGAGCGCG TCGGCGGCTC CACCACCGCC
CCGCTGCTGA AGGTCGAGCG CGCGCGAAAG CAGTTCGGCG GCGTGGTTGC AGTCAACGAC
GTGTCGTTCG AGGTCAACGC CGCGGAGATC GTCGCGCTGA TCGGCCCGAA CGGCGCCGGC
AAATCGACCA CCTTCAACCT GATCACCGGC ATCCTCACCA CTACCGGCGG ACGGATCGAA
GTGCACGGCA AGCCGGTCGA CAACACGCCG CCGCAGGAGG TGGTGAAGCT CGGCATCGCC
CGGACCTTCC AGCACGTCAA GCTGGTGCCG GACATGACCG TCCTGGAGAA TGTCGCGATC
GGCGCGCACT TGCGCGGCCG CTCCGGGGCG ATCACCAGTA TGCTGCGGTT CGATCGCGGC
GACGAGGCCA AGCTGCTCGC CGAAGCCGCG CGCCAAGTCG AGCGCGTCGG GCTCGGCGCC
GAGATCGATC AGCTCGCGGG GTCGCTCTCG CTCGGCCAGC AGCGCATCGT CGAAATCGCG
CGCGCGCTGT GTGCCGATCC CGAACTGCTT CTGCTCGACG AGCCGGCCGC CGGCCTGCGC
CACATGGAAA AGCAGCGGCT CGCTGCGCTG CTGCGGCAGC TCAAGGACAG CGGCATGTCG
GTTCTACTGG TCGAACACGA TATGGGCTTC GTGATGGACC TCGCCGACCG CATCGTCGTG
CTCGACTTCG GCACCAGGAT CGCCGAAGGC ACGCCCGACG CGATCAAGAC CAATCCAGAC
GTGATCAAAG CCTATCTCGG AGCGCTGGCA TGA
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| Protein sequence | MPRWLPILLF AAVMTALPLI PGIPPFWIVL LDNIGLAALV AMGLVLLTGV GGLTSFGQAA
FCGFGAYTTA YITTVYGLSP WLALPASLAV AGIAAVLLGL MTVRLSGHYL PLGTIAWGIA
LYYLFSKLDF LGRNDGISRV PPLSIGPIDM YDPHTIYFVI WAMVLISAVL TMNLLDSRTG
RAIRALRRGH VAAEAFGVQT ARAKLLVFIY AAVLAGLSGW LYAHFQRNVN PTPFGPQAGI
EYLFIAVVGG AGYVWGGVLG AAIVIILKEV LQGYLPLLFG GQGQLEIIVF GILLVVLLQL
APGGVWPWLA NLVPLKFRRA VTGNAGGLPA RERVGGSTTA PLLKVERARK QFGGVVAVND
VSFEVNAAEI VALIGPNGAG KSTTFNLITG ILTTTGGRIE VHGKPVDNTP PQEVVKLGIA
RTFQHVKLVP DMTVLENVAI GAHLRGRSGA ITSMLRFDRG DEAKLLAEAA RQVERVGLGA
EIDQLAGSLS LGQQRIVEIA RALCADPELL LLDEPAAGLR HMEKQRLAAL LRQLKDSGMS
VLLVEHDMGF VMDLADRIVV LDFGTRIAEG TPDAIKTNPD VIKAYLGALA
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