| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1992 |
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| Symbol | |
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| ID | 6409652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2153995 |
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| End bp | 2154849 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711878 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001990990 |
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| Protein GI | 192290385 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.216528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAACC AGATCGTCAC GCAACGCGAT GTGATCCGCT ACACCGCGGG CCGGGTTGTG
GCCGCGGCCG GGATCACGGC GATCGTCACC ATCATCTTTC TGATTTCCGA TCTCGGTACC
GACTTGCACG CGACCGTTGA GGTCGGCGCC GTGGTGAAGG CGTCACTGGT GGTGGCGCTC
GGCGTCTCGA CCACGCTTTC GGGCGCGATG GCGTATCGGT CGGCGCGGCT GATGCGGCAG
CTGACCTCGA CCCGCGCCGA GCTGATGCGG ATGTCGCGCA CCGATCCGTT GACCGGTCTG
CTCAACCGGC GCGGCTTCGA CGATGCGGCG GCGACCGTGC TGGCAGAGGC CGCCGATGCC
GGCCAGCGGG TAGTGGCGTT GATGTGCGAC ATCGACCGCT TCAAGGCAAT CAACGATCAT
TACGGCCACA ATATCGGCGA CCGCGTACTC GCCGAGATCG GTGGCATCCT GCGCGACTTC
GCCGCGCCGC GCGGCATGCT GATTGCGCGC CATGGTGGCG AAGAATTCGC CGGCCTGATG
GTCGGCGTCA GCGACGCGCA GGCCAACGAC TATGCGATGA CGCTGTGCCG GATGTGCGCC
ACCGATGTGC CGTGCGACGG CCGGCTGGTG CCGGTGACGA TGAGCTTCGG CGTCGCAGCC
TATGCGGGCG GCGAACTGCC GGCGCTGATG CGCCGCGCCG ATCTGGCGCT GTATCGCGCC
AAGGATCTCG GTCGCAACTG CGTGGTGCAG CTCGAAGGCA GCGAGGGAGT CCCGGCCGCT
GCCACGACGC CGTCAGGCGG GGTGCGAGAA ACCGAGATAG CTGGCGACAA CCGCCTCGTT
GCGGGCGACC TCTGA
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| Protein sequence | MPNQIVTQRD VIRYTAGRVV AAAGITAIVT IIFLISDLGT DLHATVEVGA VVKASLVVAL
GVSTTLSGAM AYRSARLMRQ LTSTRAELMR MSRTDPLTGL LNRRGFDDAA ATVLAEAADA
GQRVVALMCD IDRFKAINDH YGHNIGDRVL AEIGGILRDF AAPRGMLIAR HGGEEFAGLM
VGVSDAQAND YAMTLCRMCA TDVPCDGRLV PVTMSFGVAA YAGGELPALM RRADLALYRA
KDLGRNCVVQ LEGSEGVPAA ATTPSGGVRE TEIAGDNRLV AGDL
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