Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1987 |
Symbol | |
ID | 6409647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2148312 |
End bp | 2148773 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642711873 |
Product | hypothetical protein |
Protein accession | YP_001990985 |
Protein GI | 192290380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.64403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCGA CCCTCGAAAC CAAATACGTC TTCACCATCA CCGCGCGGAT CGGTGATGTG ACCTCGGCCG GCGAGATCGG CACCGGCGTG CGCCGGATCA TTCCGATCCT CGGCGGCGAG GTGAAGGGCG AGGGGATCAG CGGCAAGGTG CTGCCGTTCG GCGCTGACTT CCAGATCATC CGGCCGAACG AGCTGATCGA GCTGGAAGCC AAATACGCCT TCGAGACCGA TGACGGCGCG GTGGTTTATG TCGAGAATGC CGGCATTCGG TTTGGGCCGG TCGAACTCTT GCAGAAGCTG AAATGCGGAG AGCCGGTCGA TCCGAAGCTG ATCTATTTCC GAACCCGGCC GCGATTCGAG ACCGGCCACC CGAACTATCA GTGGCTGATG CAGCATTTGT TCATCGGCTC CGCCGCCCGC CACGCCGACC GCGTCGTCAT CGACGTGCAT CAGGTGTTGT GA
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Protein sequence | MTPTLETKYV FTITARIGDV TSAGEIGTGV RRIIPILGGE VKGEGISGKV LPFGADFQII RPNELIELEA KYAFETDDGA VVYVENAGIR FGPVELLQKL KCGEPVDPKL IYFRTRPRFE TGHPNYQWLM QHLFIGSAAR HADRVVIDVH QVL
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