| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1984 |
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| Symbol | |
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| ID | 6409644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2145102 |
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| End bp | 2146112 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711870 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001990982 |
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| Protein GI | 192290377 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.86389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAGA CTCTGCTCGC GCTGCTGCTT GCCGCCAGCG TGACGCCCGC GCTTGCGCAG
GACAAAACCG TCAACTGGAA AGTCTCGCTG TGGGTGCCGC CGGCGCATCC GCTTGTGCCG
GCGACCAAGG CGTGGGCCGA GGACATCCAG AAGGCTTCCG GGGGCAGCAT CCGGATGACA
GTTTTCCCCT CCGAGCAGCT CGGCAAGGCG TTCGATCATT ACGACATGGC GCGCGACGGC
ATCGCCGATG TCACCTACGT CAATCCCGGC TATCAGCCCG GCCGCTTCCC GATCGTCTCC
GCCGGCCAGC TTCCTTTCGT GTTCAAGGAC GGCAAGAAGG GCACGCTGGC GCTGAACGAG
TGGTACCACA AATACGCCCC GACCGAGATG AAGGACACCA AGCTATGCTT CGCCTTCATC
CATGATCCCG GCGCGCTGCA CGGCAAGAAG AAGGTGCTGC TGCCGTCCGA CATGAGCGGC
CTGAAAGTGC GGCCGGCGCA ATCGACCATC GGCGAAATGG TAAAGTTGTT CGGCGGTACC
AATGTGCAAG CTTCGGCGCC GGAATCGCGC GACGCGCTGG AACGCGGCGT TGCTGACGAG
ATCACCTTCC CCTGGGGCTC GGTGTTCCTG TTCGGCATCG ACAAGGTGGT CAAGTATCAC
ATGGACGTGC CGCTCTACAC CACGGTGTTC ACCTACAACA TCGGGCTGAA GGCCTATAAT
GCGCTGTCGG ACGCGCAGAA GAAGATCATC GACGATCACT GCACGCCAGA ATGGGCCTCC
AAGGTCACCG ACCCTTGGAC CGACTTCGAA GCCAATGGCC GCGTCAAGAT GAAGGCGTTG
CAGGACCACG AGGTCTATCC GCTGACCGAT GCGCAGCTCG CCGAATGGAA AAAGGCAACC
AAGCCACTGC GTGACAGCTG GGCCGAGCAG GTCAAGAAGT CGGGCGGCGA CCCCGCCGCG
GTCGAGGCCG ATCTGCAGAA CGCGCTGAAG AAGTACGACG CGGGGCTGTG A
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| Protein sequence | MRKTLLALLL AASVTPALAQ DKTVNWKVSL WVPPAHPLVP ATKAWAEDIQ KASGGSIRMT
VFPSEQLGKA FDHYDMARDG IADVTYVNPG YQPGRFPIVS AGQLPFVFKD GKKGTLALNE
WYHKYAPTEM KDTKLCFAFI HDPGALHGKK KVLLPSDMSG LKVRPAQSTI GEMVKLFGGT
NVQASAPESR DALERGVADE ITFPWGSVFL FGIDKVVKYH MDVPLYTTVF TYNIGLKAYN
ALSDAQKKII DDHCTPEWAS KVTDPWTDFE ANGRVKMKAL QDHEVYPLTD AQLAEWKKAT
KPLRDSWAEQ VKKSGGDPAA VEADLQNALK KYDAGL
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