| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1983 |
|---|
| Symbol | |
|---|
| ID | 6409643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2143761 |
|---|
| End bp | 2144933 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642711869 |
|---|
| Product | 4-hydroxybenzoate 3-monooxygenase |
|---|
| Protein accession | YP_001990981 |
|---|
| Protein GI | 192290376 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02360] 4-hydroxybenzoate 3-monooxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.334759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACAC AAGTGGCCAT CATCGGCGCG GGTCCGTCCG GACTGCTGCT CGGCCAGCTG
CTGCACAAAT ACGGCATCGA CGCCGTCATC GTGGAACGCA AGGATCCGGA CTACGTGCTG
TCGCGGATTC GCGCCGGCGT GCTCGAACAG GGCATGGTCG ACCTGCTCGA CGAAGCCGGC
GTCTCCACCC GGTTGCACCA GGAAGCGCTG GTGCACGGCG GCTTCGAGAT CGCGTTCGCC
GGTCAGCGGC ACCACATCGA TCTGAGGGGC GCGACCGGCG GCAAGAGCGT CACCGTGTAT
GGCCAGACCG AGGTCACCCG CGACCTGATG GAAGCGCGTA GCGCCGCCGG TCTCACCACG
ATCTACGACG CCGCCGACGT CAGCCTGCAC GACTTCGAAG GCGCCCATCC CAAGGTGCGC
TACGTCAAGG ACGGCACCAC GCGCGAGATC GTGTGCGATT TCATCGCCGG CTGCGACGGC
TTCCACGGCA TCAGCCGGCA GAGCGTGCCG GCAAGTGCGG TGCAGTCGTT CGAGCGGGTG
TATCCGTTCG GCTGGCTCGG ATTGCTCTCC GACACTCCGC CGGTGTCGTC GGAGCTGATT
TACGTCAACC ACGACCGCGG CTTTGCGTTG TGCTCGATGC GCTCGATGCA CCGCAGCCGC
TATTACGTGC AGTGCCCGCT CACCGACGAC GTCGCCGACT GGAGCGACGA CCGGTTCTGG
GACGAGCTGA AGAGCCGGCT CGATCCGGAA ACCGCCGGAA AGCTGGTCAC CGGCCCATCG
ATTGAAAAGA GCATCGCGCC ACTACGCTCA TTTGTCGCCG AGCCGATGCG GTTCGGCCGG
CTGTTCCTCG CCGGCGACGC CGCCCACATC GTGCCGCCGA CCGGCGCCAA GGGCCTGAAC
CTCGCCGCCA GCGACGTTTA CTATCTCTCT CGCGTCATGC GCGAATACTA CGCGGAGAAG
TCGGAGGCCG GCATCGATGC CTATTCGGCG AGCGCGCTTC GCCGGGTGTG GAAGGCCGAG
CGGTTCTCCT GGTGGATGAC CTCGCAGCTC CACCGCTTCC CCGACAGCGA CGCCTTCTCC
CAGCGCATCC AGACCGCCGA ACTCGACTAC CTGGTCAACT CTAAGGCCGC GCTCACCTCG
CTGGCGGAGA ACTACGTCGG CCTGCCGTAC TGA
|
|---|
| Protein sequence | MRTQVAIIGA GPSGLLLGQL LHKYGIDAVI VERKDPDYVL SRIRAGVLEQ GMVDLLDEAG
VSTRLHQEAL VHGGFEIAFA GQRHHIDLRG ATGGKSVTVY GQTEVTRDLM EARSAAGLTT
IYDAADVSLH DFEGAHPKVR YVKDGTTREI VCDFIAGCDG FHGISRQSVP ASAVQSFERV
YPFGWLGLLS DTPPVSSELI YVNHDRGFAL CSMRSMHRSR YYVQCPLTDD VADWSDDRFW
DELKSRLDPE TAGKLVTGPS IEKSIAPLRS FVAEPMRFGR LFLAGDAAHI VPPTGAKGLN
LAASDVYYLS RVMREYYAEK SEAGIDAYSA SALRRVWKAE RFSWWMTSQL HRFPDSDAFS
QRIQTAELDY LVNSKAALTS LAENYVGLPY
|
|---|
| |