| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1982 |
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| Symbol | |
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| ID | 6409642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2142973 |
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| End bp | 2143422 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711868 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001990980 |
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| Protein GI | 192290375 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.319372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACCG ATCCCGATCC GAACCACACC GCCGCGACCG TCGGCATTCC TGACGGCTTC
GTGCGCCACG CCCGTTCGAG CCCCCTCACC GCGCCGTGGG AGCCGCTCTA CGCGAAGACC
ACCGCGGACG CGGTGATGCT CGGCTTGCGG ATTCGCGAGT GCCACACCAA TTCGCGTGGC
CTCGCTCATG GCGGGCTGAT CACCGCGCTG GCCGACAACG CGATGGGCTA TAGTTGCGGC
CTCAAGCTCG GCGGCGGCGG GCGGCTGCTG ACGTCGTCAC TGGCCATCGA CTTCATCGGT
CCGGCCAAGA TCGGCCAATG GCTGCAGATC GAGCCGGAGG TGATCAAGCT TGGCGCCAAG
CTGTGCGTCG CGCAGTGCTT TGTCACCGCC GGCGGTACTC GCTGCGCCCG CGCCAACGGT
ACGTTCAGCG TGGTGAAGGC GAAGGAGTGA
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| Protein sequence | MTTDPDPNHT AATVGIPDGF VRHARSSPLT APWEPLYAKT TADAVMLGLR IRECHTNSRG
LAHGGLITAL ADNAMGYSCG LKLGGGGRLL TSSLAIDFIG PAKIGQWLQI EPEVIKLGAK
LCVAQCFVTA GGTRCARANG TFSVVKAKE
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