| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1976 |
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| Symbol | |
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| ID | 6409636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2136231 |
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| End bp | 2137556 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642711862 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_001990974 |
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| Protein GI | 192290369 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0260904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTATC TCGTCACTCA TTATTGGATC TGGCTGGCGG CGGCGTTCAT CGTCGGCGCC
GTCACGCCGC TGCTCGCGGA CAAATTCGGT TGGGCGGCCG ACCTCGAGAA CTACTGGGTG
AGCCGGGTCG GCGTGGTGCT GGCGGTCGCG CTGGTGCTGG TGCTGGCGCA GCTCGCGTCC
GGCAAGGCCG AGCTGCTGCT GGAGGCCGGC ATCGGTCTGG TGATCGCCTA CGTCGCCGGT
GGGCTGGCCG GCGGCATCGC GCCGGGCCTG CTGCCTGTGC GGTTTGAAGG TTGGTGGGTC
GGCCTGTTCG CGACCGGCCT GATCCTCGCG GTGTTCGGCA TCACCACGCT GCCGAAGCTG
GAGCCGGACC TGCGCGAGCG TGTCGCCGAT GTGGTGAAGG AAGCCGGCGC TGATCCCTTG
AACTTTGACG TCGCCGGGCG CGACGTCCTG CTGCCGGCCG ACCTCGGTAG CGACAAGGTG
CGGGCCTCAC TTGGCGAGCA GATCCTGAAG GTGCCGGGCG TGCGCCGCGT CGCCGATGTC
GACGAACTGA GCGGTTCAGC GCTGGCCGCG AAGACCGTGG CGAAGCTCCA GGCCGAAGCT
GAGGTGAAGG CCAAGGCCGA AGCGGCCGCA AAGGAAGCAG CCGCCAAGGA GGCTGCTGCC
AAGGCGGCCA AGGACGCGGC GCAGAAGCAC GCGGCCGCAA AGGCCAAGGC GGACGCCGAG
GCAAAGGAAG TCGCCGCGAA AGCCGCTGCT GAAGCCGCGG CCAAGGAAGC TGCTGCGAAG
GAAGCCGCCG CCAAGGAAGC TGCGGCTAAG GCCACGGCGG AAGCGGCCGC CAAGCAGGCT
GCCGCCGATG AGGCGGCGAA GAAGGCGGCC GATGAAGCCG CCAAGCAGGC GGCTGCTAAG
CCCGCCGCGG CGCCTGCGGA GATCAAGACC GCCAATGCCA CCGGCGCGCT GCCGGTCAGC
CCGGCGCAGG ACTGTCAGGG GCGGGTGTCG GCTCTTGCTT CGGCCGAGAA GATCAACTTC
GAGCGCCGCA GCGCGGTGAT CGACAAGGCG TCGCAGCCGC TGCTGGACAA GCTCGCCGCG
GCGATCAAAC AGTGCCCGGC GGTGACCATC GAGGTTGCCG GCTACACCGA TGGCGCTGGC
AAGAAATCCG CCAACGTCGC GCTGTCGAAA CGCCGCGCCG AAGCGGTGGT GGCGAGCCTG
ACCAAGGTCG GGATCGGCTC GGTCAAGCTG GTGGCGGAGG GCTACGGTTC GGCCAAGCCG
ATCGCCGCCA ACGACACCGC CGAAGGCCGC GCGCAGAACC GGCGGATCGA ATTCGTGGTG
AAGTAA
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| Protein sequence | MLYLVTHYWI WLAAAFIVGA VTPLLADKFG WAADLENYWV SRVGVVLAVA LVLVLAQLAS
GKAELLLEAG IGLVIAYVAG GLAGGIAPGL LPVRFEGWWV GLFATGLILA VFGITTLPKL
EPDLRERVAD VVKEAGADPL NFDVAGRDVL LPADLGSDKV RASLGEQILK VPGVRRVADV
DELSGSALAA KTVAKLQAEA EVKAKAEAAA KEAAAKEAAA KAAKDAAQKH AAAKAKADAE
AKEVAAKAAA EAAAKEAAAK EAAAKEAAAK ATAEAAAKQA AADEAAKKAA DEAAKQAAAK
PAAAPAEIKT ANATGALPVS PAQDCQGRVS ALASAEKINF ERRSAVIDKA SQPLLDKLAA
AIKQCPAVTI EVAGYTDGAG KKSANVALSK RRAEAVVASL TKVGIGSVKL VAEGYGSAKP
IAANDTAEGR AQNRRIEFVV K
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