Gene Rpal_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1974 
Symbol 
ID6409634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2134713 
End bp2135375 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID642711860 
Producthypothetical protein 
Protein accessionYP_001990972 
Protein GI192290367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.297418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCAC GCAAGTTTCA CATTTTGATG GGGGACGTGA TCTCGAGCTC GAAGCGCGAT 
CCAATTGAGT TGCAACAGCA ACTCAAAGCC GTGATCTTGA GCGCCAATAA GCAGCTCTCC 
GATCAGCTTC TATCTCCGTA CACCACTACG CTCGGTGATG AATTCCAGGG GGTGGCGAAA 
TCACTGGTGG CCTCGGTGAG GACGTTGTTC GTCTTGGAAG AAGAGATTTT GCGTCGAGGG 
TTCTCTTTTA AATTCCACTA TGTCGCTCAT TTCGGCGCGA TCGTTACGCC GATCAACCCG 
GAAATCGCCT ACGAAATGAT GGGGCCTGGA TTGGCCGAGG CTCGAGCTCT CCTGGTAGCA 
AAGCAACGCA AGCGTCCGCG ATTCACCTTC GAATACGGCG ATCCGAGGAT CAGTCGGATG 
CTCAATGGAT TGTTCATGGT GGTCGCGGGC GTCGTCGACA GTTGGAAAAT GCGCGACTTT 
CCGTTGGTGG TGGATTTGCT TGAGAATTCG AACGATTCAC AGGTTGGAAC GAAGTGGGGC 
AAGGATCGCA CGCTGATCTG GCGCCGCCGC AACAGCCTTC GTACAGACGA GTATCTGGCG 
CTGAGGTCGT CGCTGCTCGA TGTCTGTGCT ATCATTGAGC AGCATTCTGC CGCGTCCCGC 
TAG
 
Protein sequence
MMPRKFHILM GDVISSSKRD PIELQQQLKA VILSANKQLS DQLLSPYTTT LGDEFQGVAK 
SLVASVRTLF VLEEEILRRG FSFKFHYVAH FGAIVTPINP EIAYEMMGPG LAEARALLVA 
KQRKRPRFTF EYGDPRISRM LNGLFMVVAG VVDSWKMRDF PLVVDLLENS NDSQVGTKWG 
KDRTLIWRRR NSLRTDEYLA LRSSLLDVCA IIEQHSAASR