| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1967 |
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| Symbol | |
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| ID | 6409627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2123438 |
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| End bp | 2124982 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711853 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001990965 |
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| Protein GI | 192290360 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.595404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGA ACCAGCTTTA TCACGGCATC ATTTCCGGCG ACCGCCGCCG CAGCTTCGAC
GAGGTGAACG CGCGCGTCGC GACCATCGCC GGCGGCCTGC AGGCGCTCGG CGTCAAGCCC
GGCGATTGCG TCTGCGTGCT GATGCGCAAC GACATCGCCT TTATGGAAGC GGTGTACGGC
GTGATGACGC TCGGCGCCTA TGCGGTGCCG GTGAATTGGC ATTTCAAGCC GGAAGAAGTC
GGCTACATCA TCGGCGATTC CGCCACGCGG GTGCTGATCG GCCACGCCGA TCTGCTGCAC
AGTGTCGCCT CGGCGATTCC GGCCGACCTC ACCGTGCTCA GCGTGCCGAC GCCACCCGAA
GTGATCGCCA ACTACAAGAT TGCGCCGGAT CATCTGTCGC CGCCAAACAA TGCGATCGAT
TTCGACGGCT GGCTGGCGCA GCAGAAGCCG TATGACGGTC CGGCGCAGCC GCAGCCGCAG
AACATGATCT ACACCTCCGG CACCACTGGC CATCCGAAGG GCGTCAAGCG GTTCGCGCCG
ACTCTGGAGC AGGCCGTGCA CGCCGAGAAG ATGCGCGCGA CGATCTACGG CCTTAAGCCG
CAGGTGCGCG CGCTGTGCCC GGGGCCGCTG TATCACTCCG CGCCGAATTC GTTCGGCATC
CGTGCCGGCA AGCTCGGCGG CGTGCTGGTG CTGATGCCGC GATTCCACCC GGAGGAGTTC
CTGCAATTGG TGCAGGAGCA CAAGATCGAC ACCGTGTTCA TGGTGCCGAC GATGTTCATC
CGGCTGATGA AGCTGCCCGC GGAGGTGCGC GCCAAGTACG ACGTCTCGTC GCTGCGCCAC
GTTATCCACG CCGCCGCGCC ATGCCCGGCC GACGTCAAGC GCGCGATGAT CGAGTGGTGG
GGGCCGGTGA TCTATGAGTT CTACGGCTCG ACTGAATCCG GTGCGGTGAC GTTCGCGACC
TCCGAAGACG CGCTGAATAA GCCCGGCACG GTCGGCAAGA TCGCGCACGG CGCTGAGCTG
AAGTTCATCG ACGACGACGG CAACGAAGTG CCGCAGGGCG AGATCGGCGA GATCTTCTCG
CGGATCGCCG GCAATCCGGA CTTCACCTAT CACAACAAGC CGGAGAAACG CGCCGAGATC
GACCGCGGCG GCTTCATCAC CTCGGGCGAC ATGGGCTATC TCGACGACGA CGGCTACGTG
TTCATCTGTG ATCGCAAGCG TGACATGGTG ATCTCCGGCG GCGTCAACAT CTATCCGGCC
GAGATCGAGG CGGCACTGCA CGCCGTGACG GGCGTGCACG ACTGCGCGGT GTTCGGTATT
CCGGACGCGG AGTTCGGCGA GGCGCTGATG GCGATGCTGG AGCCGCAGCC GGGTGTGACG
CTCGACGAGA GCTTCATCCG CTCGCAACTC AAGCTGGCGC TAGCCGACTA CAAGGTGCCC
AAGCACATCA AGATCATGCC GGAACTGCCG CGCGAGGATT CCGGCAAGAT CTTCAAGCGC
CGCCTGCGCG ATCCGTATTG GGCGAATGCC GGCCGAGTGA TTTAG
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| Protein sequence | MSENQLYHGI ISGDRRRSFD EVNARVATIA GGLQALGVKP GDCVCVLMRN DIAFMEAVYG
VMTLGAYAVP VNWHFKPEEV GYIIGDSATR VLIGHADLLH SVASAIPADL TVLSVPTPPE
VIANYKIAPD HLSPPNNAID FDGWLAQQKP YDGPAQPQPQ NMIYTSGTTG HPKGVKRFAP
TLEQAVHAEK MRATIYGLKP QVRALCPGPL YHSAPNSFGI RAGKLGGVLV LMPRFHPEEF
LQLVQEHKID TVFMVPTMFI RLMKLPAEVR AKYDVSSLRH VIHAAAPCPA DVKRAMIEWW
GPVIYEFYGS TESGAVTFAT SEDALNKPGT VGKIAHGAEL KFIDDDGNEV PQGEIGEIFS
RIAGNPDFTY HNKPEKRAEI DRGGFITSGD MGYLDDDGYV FICDRKRDMV ISGGVNIYPA
EIEAALHAVT GVHDCAVFGI PDAEFGEALM AMLEPQPGVT LDESFIRSQL KLALADYKVP
KHIKIMPELP REDSGKIFKR RLRDPYWANA GRVI
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