| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1963 |
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| Symbol | |
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| ID | 6409623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2117974 |
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| End bp | 2119248 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711849 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001990961 |
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| Protein GI | 192290356 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.251732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATTTTT CTCTGCCGCC CGATCTGGTC GCCTATCTCG CCGAACTCGA TCGCTTCATC
GACGCCAAGA TCAAGCCGCT CGAGCAGGCG GATGACAACA TCCGCTTCTT CGATCATCGC
CGCGAATGGG CGCGCACGGA TTTCGAGCAC GGCGGGCTGC CACGCCACGA GTGGGAAGAT
TTGCTGCGCA AGGCGAAGAA CCTCGCCGAC GACGCCGGTC ATCTGCGCTT TGCGATTCCG
AAGCGTTACG GCGGCCAGGA CGGCACCAAC CTCTGGATGG CGGTGATCCG CGAACACTTC
GCCGCCAAGG GACTCGGCCT GCACAACGAT CTGCAGAATG AGCATTCGAT CGTCGGTAAT
TTTCCGATCG TGAAGATGCT GGATCTCTAC GGCTCGCCCG AACAGAAGGC GATGATCGAC
GGTTCGATCA CCGGCAAGTA CCGCATCACG TTTGGCCTGA CAGAGCCCGA TCACGGCTCC
GACGCCACGC ACATGGAAAC GCGCGCCGAA GAAGCGGTGC GCGACGGCAA GAAGGGCTGG
GTGATCAACG GCGAGAAGAT GTGGACGACG GGGATGCACG TCGCCACGCA TTGCGCGCTG
TTCGCCCGCA CCGCCGGCAA GGACGGCGAT GCACGGGGCA TCACCTGCTT CCTGGTGCCG
GCCGATGCGC CCGGTGTGAA GGTCGAAGAG TATCTGTGGA CCTTCAACAT GCCGACCGAC
CATCCGCGGG TGTCGTTCAA GGACGTGTTC GTCGCCGAGG ATGCGGTGTT CGGCGAGGTC
GGTCGCGGTC TGTCGCTGGC GCAGTGCTTC GTGCATGAGA ACCGCATCCG CCAAGCAGCG
TCGTCGCTCG GCGCGGCGGT GTTTTGTATC AACGAGAGCG TCAAATACGC GCGTGAACGC
AAGCCGTTCG GCGACGAGTT GGCGCGCAAC CAGGCGATCC AGTTCCCGCT GGTCGAACTC
GCCACCCAGG CCGAAATGCT GCGCCTGTTG ATCCGCAAGA CGGCTTGGGA GATGGATCAG
ATGACCCAGG CCCAGGTGGA GCACACGCTG TCCGACAAGG TTTCGATGTG TAACTACTGG
GCGAATCGGC TGTGCGGCCA GGCGGCCGAC CGCGCGATTC AAGTGCACGG CGGCATCGGC
TATTCGCGCC ACAAACAGTT CGAGCACATC TACCGCCACC ACCGCCGCTA TCGCATCACT
GAAGGCAGCG AGGAAATCCA GATGCGGAAG GTGGCGGGCT TCCTGTTCGG CTACATGGGC
GCGAACAAGA GGTGA
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| Protein sequence | MDFSLPPDLV AYLAELDRFI DAKIKPLEQA DDNIRFFDHR REWARTDFEH GGLPRHEWED
LLRKAKNLAD DAGHLRFAIP KRYGGQDGTN LWMAVIREHF AAKGLGLHND LQNEHSIVGN
FPIVKMLDLY GSPEQKAMID GSITGKYRIT FGLTEPDHGS DATHMETRAE EAVRDGKKGW
VINGEKMWTT GMHVATHCAL FARTAGKDGD ARGITCFLVP ADAPGVKVEE YLWTFNMPTD
HPRVSFKDVF VAEDAVFGEV GRGLSLAQCF VHENRIRQAA SSLGAAVFCI NESVKYARER
KPFGDELARN QAIQFPLVEL ATQAEMLRLL IRKTAWEMDQ MTQAQVEHTL SDKVSMCNYW
ANRLCGQAAD RAIQVHGGIG YSRHKQFEHI YRHHRRYRIT EGSEEIQMRK VAGFLFGYMG
ANKR
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