Gene Rpal_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1960 
Symbol 
ID6409620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2116198 
End bp2116578 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content65% 
IMG OID642711846 
Producthypothetical protein 
Protein accessionYP_001990958 
Protein GI192290353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGACG AACCGAGGCC GGACGAACTG ATCAAGGCGG TGGCGGACTT TCTGCGCGAG 
CAGATCGTCC CGCAGATATC AGGCCACGCC GCATTCAAGC TGCGGGTCGG CATCAACGCG
CTCGATCTGG TGACGCGCCA ACTGGCGCTG TCGGGCGAGA GCGACGCCGA AGAACACGCC
AGCCTGAAGG CGCTGTTCGG CCACGACGGC TCGCTGTTCA ACCTCAATGC CGAGCTCGCC
GACCGCATCG CCTCCGGCGC GGTCGATCTG TCGACGCCCG GCATCAAGGA CCATCTGTGG
CGCACCACGC TGGCGAAGCT CGCCGTCGAT CAGCCGAACT ACGCGAGCTA TCGGCGGGAG
GTTGAACGTT GCAGCGATTA G
 
Protein sequence
MQDEPRPDEL IKAVADFLRE QIVPQISGHA AFKLRVGINA LDLVTRQLAL SGESDAEEHA 
SLKALFGHDG SLFNLNAELA DRIASGAVDL STPGIKDHLW RTTLAKLAVD QPNYASYRRE
VERCSD