Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1952 |
Symbol | |
ID | 6409612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2105431 |
End bp | 2106135 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642711838 |
Product | ABC transporter related |
Protein accession | YP_001990950 |
Protein GI | 192290345 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.571715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTCGG TGCGTGAGGT CACCACCGCC TATAAGGGCC TGGTCGCGAT TTCGAACGTC TCGATCGAGG TCGAGCAGGG CGAGATCGTC TGCGTCGCCG GCGCCAATGG CGCGGGCAAA TCGACGTTGC TGAAATCGAT TGCCGGTGCC GAGCGCATTC GTTCCGGCCA GGTGCTGTTC GACGGCGAGC GGCTCGACGG CGTCCCGCAG CATGTGATCA CCAAGCGCGG CGTCGCCTAT GTGCCGGAGA ACCGCCGGCT GTTTCCCCGG CTGTCGGTCC ATGACAATCT GCGGCTCGGC AGTTACCTCT ATCGCGGCGA AGCCGATCGC GAGAAGCCGC TGGAGTTCGT GTTCAGCCTG TTTCCCCGGT TGCAGGAACG GCTGGAGCAG CGTGCCGAGA CTTTGAGCGG TGGCGAGCAG CAGATGCTGG CGATCGGCCG CGCGCTGATG ACTCGGCCGC GCCTGCTGAT GCTCGACGAG CCGTCGCAGG GCATCATGCC TAAGCTGGTC AGCGAGATCT TCCAGTCGGT GAAGAAGATC CGCGACGCCG GCATGACCGT GCTGATCGTC GAGCAGCGCA TGGCCGAATG CCTCGAAATC GCCGACCGCG CCTACATCCT GCAGACCGGC CGCGTGCTGA TGCAGGGCAA GGCCGCCGAG CTGATGGATA ACCCCGACGT CCGGAAGGCG TATCTGGGGC TCTAG
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Protein sequence | MLSVREVTTA YKGLVAISNV SIEVEQGEIV CVAGANGAGK STLLKSIAGA ERIRSGQVLF DGERLDGVPQ HVITKRGVAY VPENRRLFPR LSVHDNLRLG SYLYRGEADR EKPLEFVFSL FPRLQERLEQ RAETLSGGEQ QMLAIGRALM TRPRLLMLDE PSQGIMPKLV SEIFQSVKKI RDAGMTVLIV EQRMAECLEI ADRAYILQTG RVLMQGKAAE LMDNPDVRKA YLGL
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