| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1949 |
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| Symbol | |
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| ID | 6409609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2102852 |
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| End bp | 2103730 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711835 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001990947 |
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| Protein GI | 192290342 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.926324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCACCG CGACGATCAT CCAGTCTCTC GCCAGCGGTC TGCTGATGGG ACTTCTGTAC
GGCTTGGTCG CGGTCGGCCT GGCTCTGATC TTTGGCCTGA TGGATGTCAC CAACTTCGCC
CACGGCGAAT TCCTGATGTT GGCGATGTAC ATCACCTTCT TCCTGTTCGC GTTCTTCGCG
ATCGATCCGA TCCTCGCCGC TCCGCTCGTC GGGGCGGCGA TGTTCGTGTT CGGCGCGGTG
ATTTACCTAT TGGTCGTCCG ATTTGCGATG AGAGCCAGAG CCAATATCGG CATGGTGCAG
ATCTTCACGA CCTTCGGCCT CGCAATCCTG ATGCGCGGCT TGGCGCAGTA CTTCTTCACC
CCCGACTATC GCAGCATCAA CGTCTCCTGG CTGGGCGGCA AGACGCTGGA GATCGGCGGC
GTGTTCCTGC CTGTGCCGCA ACTGGTCGGC GCGCTGGTGT CGATCGCCGC GTTCGGCGCG
TTGTACTTCT TCATGAAGAA GACCGATTTC GGCCGTGCGC TCGAAGCGAC CCGCGAGGAC
GCAGGCGCGG TGGCCCTGGT CGGCATCGAT AAGAACAAGG TGTTCGCGCT GGGCTGGGGG
CTCGGCTCGG CATTGATCGG TCTGGCGGGC GCCGTGATGG CGATCTTCTT CTATATCTAT
CCCGACGTCG GCGCCTCGTT CGCGCTGATC GCCTACGTCA CCGTGGCGCT CGGTGGCTTC
GGCAGCGTGT TCGGCGCCTT CGCCGGTGGC ATCATCGTCG GCCTGGTCGA GGCGACCACC
GCGATGATCC TGCCGCCGTC GCTGAAGTCG ATCGGCATCT ACGCCGTTTA TCTGCTGGTT
GTGTTCATTC GGCCGCGTGG CCTGTTCGGA TCGATCTGA
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| Protein sequence | MTTATIIQSL ASGLLMGLLY GLVAVGLALI FGLMDVTNFA HGEFLMLAMY ITFFLFAFFA
IDPILAAPLV GAAMFVFGAV IYLLVVRFAM RARANIGMVQ IFTTFGLAIL MRGLAQYFFT
PDYRSINVSW LGGKTLEIGG VFLPVPQLVG ALVSIAAFGA LYFFMKKTDF GRALEATRED
AGAVALVGID KNKVFALGWG LGSALIGLAG AVMAIFFYIY PDVGASFALI AYVTVALGGF
GSVFGAFAGG IIVGLVEATT AMILPPSLKS IGIYAVYLLV VFIRPRGLFG SI
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