| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1938 |
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| Symbol | |
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| ID | 6409598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2090235 |
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| End bp | 2091719 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711824 |
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| Product | ABC transporter related |
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| Protein accession | YP_001990936 |
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| Protein GI | 192290331 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.323376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAG TCTCCAGCAA CTTCGCTCCC ACACTCGAAG TCCGCGGCCT CACCAAGCGG
TTCGGCGGAC TCACTGCGGT GAAGAACCTA TCGTTCGACC TGCGCGCCGG CGAGATCTTC
GGCCTGATCG GGCCGAACGG CTCGGGCAAG TCCACCGCGA TGAAATCGAT CATGGGAATC
GAACGCCCGA CCGCCGGCGA AGTCGTGTTC CAGGGCGAGA ACGTCGCCGG CCTGCCGGCG
CACAAGATCG CCCGCAAGGG CTTCGGCATG GTGTTTCAGC ATTCGCGGCC GCTGAACCGG
CAGACCGTGC TGGAAAACAT CATGGTGGCG CTGCTGCCCG ACAGCCTGCT CGCGCTGTTT
CACGATCGCG CGCTGGTCGA GCGCGCCGAG GCGATCGCAG AACGGGTCGG CCTTGGCGCG
GTGATGCGGC GGAAGCCGCC GACCCTGCCG TTCGCCGACC TGCGCCGCCT CGAATTGGCG
AAAGCGATCG CGAGTGACCC CAAGGTCGTG CTGGTCGACG AACCGTTCGC CGGGCTGACG
CTGGCGGAGG TCGGCACCTT CTCCGAACTG ATCGCCGGCT TCCGCGATGA AGGCCGCGCG
GTGCTGCTGG TCGACCACAA CGTCAAGAGT GTCGCTGCGC TGGTCGACCG CGTGCTGGCG
ATGTATCTCG GCGAAGAGAT CTGCACCGGC GCAGCCAGTG AGGTGATGAA GAACGAGACG
GTGCGGCGGG TGTATCTCGG CGGCGCGATC GAGACCTCGG CGCGGCCGGA GACCAGCTTC
CACGACAAGG TGCCGCTGCT GCAGGTCGAG AACGTCAACG TGTTCTACGG CAAAGCTCAG
GCGCTGGAGA GCGTCTCGAT CCACGTCCAC GAGAGCGAGT TCGTTTCGGT AGTCGGGCTC
AACGGCGCCG GCAAAACCAC GCTGTTCAAT ACCATCTCTG GGCTCCTCCC CTACACCGGC
GCGATCAAGC GCGGCGGCGA AGCGCTGCGT GGCACCTCGG CGGCCAAGAT CGCGCGCGAC
GGCATCGTGC AATGTCCGGA GTCGCGCGAG CTGTTCGGCG AGATGACGGT GCGTGAGAAT
CTCGATCTCG GCGGCTACCA CCTCGCCGAC GACGTCCGCG ACAAGCAGAT CGAATGGTTG
TTCGATCTGT TCCCGATCCT GCGGGAACGA CATGGTCAGC TCGCACAGAC CCTGTCAGGC
GGCGAGCAAC AGATGCTGGC GATCGGCCGC GCCCTGATGA TGCAGCCGAA GATTCTGATC
CTGGACGAGC CGACCCTCGG TCTTGCGCCG GTGATCCTGG AGCAGTTGTC GAAGGCGCTG
GAGAAGCTGC GCCAGACCTC GTCCATCACC GTGCTGCTGG GCGAGCAGAA CGTCACCTTC
GCGCTGCCGC ATGCGGACCG TGTCTATGTG CTGGAGCACG CCCGCATCGT GTGGGAGGGC
GATCCGGCGC GCTTTGCCGC CGAGGCCGGA GAGGGCTATC TGTAG
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| Protein sequence | MDAVSSNFAP TLEVRGLTKR FGGLTAVKNL SFDLRAGEIF GLIGPNGSGK STAMKSIMGI
ERPTAGEVVF QGENVAGLPA HKIARKGFGM VFQHSRPLNR QTVLENIMVA LLPDSLLALF
HDRALVERAE AIAERVGLGA VMRRKPPTLP FADLRRLELA KAIASDPKVV LVDEPFAGLT
LAEVGTFSEL IAGFRDEGRA VLLVDHNVKS VAALVDRVLA MYLGEEICTG AASEVMKNET
VRRVYLGGAI ETSARPETSF HDKVPLLQVE NVNVFYGKAQ ALESVSIHVH ESEFVSVVGL
NGAGKTTLFN TISGLLPYTG AIKRGGEALR GTSAAKIARD GIVQCPESRE LFGEMTVREN
LDLGGYHLAD DVRDKQIEWL FDLFPILRER HGQLAQTLSG GEQQMLAIGR ALMMQPKILI
LDEPTLGLAP VILEQLSKAL EKLRQTSSIT VLLGEQNVTF ALPHADRVYV LEHARIVWEG
DPARFAAEAG EGYL
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