Gene Rpal_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1932 
Symbol 
ID6409592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2083555 
End bp2084754 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content63% 
IMG OID642711818 
Productcytochrome P450 
Protein accessionYP_001990930 
Protein GI192290325 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00525859 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC GCGCACCCGT CACCGACTGG GTCAACGACT TCGACCACAC CGATCCGCGC 
TGGACCGAAA ATCCCTATCC GATCTGGGAC GAGCTGCGCT CGGCCAGTCC GCTGGTCCAC
ACCGACCGGT TTCTCGGCTG CTACATGCCG ACGACCTTCG CGGCGGTGAA GGAAATCTCC
TACGACACCG ATCATTTCTC GTCGCGGCGG GTGATCGTCC GCAACGTCCG CTCGGAATCG
CCGCCGCCGG CGCCCCCGAT CACGTCGGAT CCGCCGGAGC ACAAGCCTGC GAAGCGGCTG
CTATTGCCAC CGTTCACGCC CGATGCGGTC GCCAAGCTCG AGCCACGGGT GCGCGCGATC
TGCAACGAAC TGATCGACGC CTTCATCGAG GACGAAGGCT GCGACGCCGC CACCGCCTAT
ACCAAGCACA TTCCGGTCAA GACCATCTGC CACATGCTCG GCATTCCGGA AGACGACAGC
GACATCTTCA TCCGTTGGAT CCACGAGATC CTTGAACTCG GCATCAACGA CGATGCCATC
CTGATGAAGG CGGTGTTCGA GATGAGCACC TATTTCCAGG GACATATCGC GCATCGCAAG
CAGAAACCGA CCGACGACCT GATTAGCACA CTGATGAACG CCCGGGACGA TAAAGGGCAA
CCGCTGTCGG ACGCCCATGT GCTCGGCTCG CTGCGGCTGC TGCTGATCGC AGGCATCGAC
ACCACCTGGA GCGCGATCGG CGCGGCGCTG TGGCACCTCG CCACGCATCC GGCCGAACGC
GAACGCCTGC TCGCCGAACC GGAGCTGATG CCGACTGCGA TCGAGGAATT CCTGCGCGCC
TATTCGCCGG TGACGATGGC CCGCGAGGTG ATGAAGGAGA CATCGATCGC CGGCTGTCCT
GTGAAGCCGG GCAACATGGT GCTGCTGTCG TTCCCCACCG CTAATCGTGA TCCATCGGTG
TTTCCCGAGG CCGACAAGGT GATGATCGAC CGCAAGGAGA ATCCGCACGT TGCGTTCGGG
CTCGGCATCC ATCGCTGCGT CGGTTCCAAT CTGGCGCGGA TGGAGATGAC CGTTGCGATC
GAGGAGTGGC TGAAGCGGAT TGCTTCGTTT AGGCTCGACC CGTCACAAAA AGTGCGCTGG
TCCGAGGGCA CAGTCCGTGG ACCGCGCAGC CTGCCGTTGT TGTTCGGCAG GCCGAGCTGA
 
Protein sequence
MSERAPVTDW VNDFDHTDPR WTENPYPIWD ELRSASPLVH TDRFLGCYMP TTFAAVKEIS 
YDTDHFSSRR VIVRNVRSES PPPAPPITSD PPEHKPAKRL LLPPFTPDAV AKLEPRVRAI
CNELIDAFIE DEGCDAATAY TKHIPVKTIC HMLGIPEDDS DIFIRWIHEI LELGINDDAI
LMKAVFEMST YFQGHIAHRK QKPTDDLIST LMNARDDKGQ PLSDAHVLGS LRLLLIAGID
TTWSAIGAAL WHLATHPAER ERLLAEPELM PTAIEEFLRA YSPVTMAREV MKETSIAGCP
VKPGNMVLLS FPTANRDPSV FPEADKVMID RKENPHVAFG LGIHRCVGSN LARMEMTVAI
EEWLKRIASF RLDPSQKVRW SEGTVRGPRS LPLLFGRPS