| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1921 |
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| Symbol | |
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| ID | 6409581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2070052 |
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| End bp | 2070969 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711807 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001990919 |
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| Protein GI | 192290314 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.166389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGAT TGGACACGAT GACGGCGTTT GTGGCCGTCG CCGACCTGCA AGGCTTCGCG
CCGGCTGCGC GAAAACTCGG GCTGTCGCCC TCCGCGGTGA CCCGGATGGT CGCGGCCCTG
GAAGAGCGTC TCGGCACCCG GCTGTTGCAA CGGACGACAC GCTCGGTCGC GCTGACCGAT
ACCGGCGTTC GCTATTTGGA ACGGGTGCGG CGGATTTTGG CCGACGTCGA AGAGGCCGAC
ACCTCCGCCG CGGCCGAGCG CATCATCCCA TCTGGCCGGC TGGTGGTTTC GGCTCCCGTC
GGCTTCGGCC GGCGTCATGT TGCGCCGCTG CTGTCGGACT ATCTGCGACG CTACCCGGAG
GTGACCGGCG AGTTGCGGCT GTCGGACCTG ATGATCAACC TGGTCGAGGA CGGTGTCGAT
TGCGCGGTCC GGATCGGACA TCTGTCGGAT TCAAGCCTGG TGGCGCGGCA GCTCGGCGCC
ATGCGCCGGA TCGTGGTGGC CTCGCCGGCC TATTTGGCGG CGCGCGGCAT TCCGGCCACG
CCGGCAGAGA TCGCGGCGCA CGATGTGATC CATTTCGGCC AGACCGGCGC GCCGGTCGGC
TGGCACTTCG TCGTCGACGG CCGCGATGTC CGCATCGCCT GCACGCCTCG CCTCGTCAGT
AATGTCGCCG ACGTCGCGAT CCTGGATGCC GAGCGGGGCG GCGGCCTGAC CCGCGTGCTG
GCCTATCAGG CGGCGGACGC GATCGCGGCG GGGCGGCTGC AGATCGTGCT GGCGACCTAC
GAAGTGCCAC CGTTGCCGAT TGCGATCGTC TATCCAACCT CGCGGCTGTT GTCGGCGAAG
GTTCGGGCCT TCATCGATCT TGCGGCGGAG ACGAGCGACT GGCGCTTCGG CGGTGATGGG
AAGAGGAGCG GGGCGTGA
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| Protein sequence | MDRLDTMTAF VAVADLQGFA PAARKLGLSP SAVTRMVAAL EERLGTRLLQ RTTRSVALTD
TGVRYLERVR RILADVEEAD TSAAAERIIP SGRLVVSAPV GFGRRHVAPL LSDYLRRYPE
VTGELRLSDL MINLVEDGVD CAVRIGHLSD SSLVARQLGA MRRIVVASPA YLAARGIPAT
PAEIAAHDVI HFGQTGAPVG WHFVVDGRDV RIACTPRLVS NVADVAILDA ERGGGLTRVL
AYQAADAIAA GRLQIVLATY EVPPLPIAIV YPTSRLLSAK VRAFIDLAAE TSDWRFGGDG
KRSGA
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