| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1902 |
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| Symbol | |
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| ID | 6409562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2048787 |
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| End bp | 2050343 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711788 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001990900 |
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| Protein GI | 192290295 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.889055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCATC CGTCGATTCA CGCCAAATCC AATCCCGACA AAGTTGCCTA CCGGATGGCC
TCGACCGGTC AGGCCCTCAC CTACCGACAG CTCGACGAGC GCTCCAATCA GGGCGCGCAT
CTGTTCCGGT CGCTGGGGCT GAAGGCCGGC GATCACATCG CGCTGCTGAT GGAAAACCGG
CTGGCGTTCA TGGAGATCTG CTGGGCGGCG CAGCGCGCGG GCCTGTATTA CACCGCGATC
AGCCGCTATT TGACCAAGGA CGAGATCGGC TACATCGTGC AGGACTGCGG CGCCAAGGTG
GTGATCACCT CCGCGCAGGG CAGCGAGACG ATGAAGTCGC TGCTGTCGGA CGCGCCGGGC
GCGCCGCTCT ACTACATGGT CGATCCGCCG ACCGCGGGCT TCCGCTCATG GGAGCAGGAA
ACCGCGGCGC AGCCGACCAC GCCGATCGCC GACGAAGTCG CCGGCTACGA CATGCTGTAT
TCCTCCGGCA CCACCGGCCG ACCGAAGGGC ATCAAGCGCG AATTCGAAGG CAACGCCATC
GACGTGCCGA GCCCGTTCCT GCGCCTGCTG TGCGAGAAGA TGTGCGGCAT GAACGTCGAG
AGCATCTATC TGTCGCCGGC GCCGCTGTAT CACGCCGCTC CTTTGCGCTT CAATATGATG
GCGACCACGC TCGGCGGCAC CTCGATCATC ATGGAGCATT TCGACGCCGA GCAGTTCCTG
GCGCTGGTCG AGAAGTACAA GGTGACGCAG TCGCAGCTGG TGCCGACGAT GTTCGTGCGC
ATGCTGAAGC TCCCCGACGA GGTCCGCTGC CGCTATGACG TGTCGTCGCT GAAAGGCGCG
ATCCATGCCG CCGCGCCCTG CCCGGTCGAC GTCAAGGCCA AGATGATCGA GTGGTGGGGG
CCGATCCTGA TCGAGTACTA CGCCGGCTCC GAGGGCAACG GCGTCACGGT CTCGACCTCG
CAGCAATGGC TGGCGCATCG CGGCACGGTC GGCAAGGCGG TGGTCGGCAC CATCAAGATC
CTCGACGACG AGGGCGAGGA GCAGCCGGTC GGCGAGATCG GCACCGTGTA CTTCGCCGAC
GCACCGTCGT TCAGCTATCA CAACGATCCG GACAAGACCA AGAAGGCCTA CAACGAGAAA
GGCTGGTCGA CGCTCGGCGA CGTCGGCTAT CTCGACGACG AGGGCTTCCT GTATCTCACC
GACCGCAAGA GCTACATGAT CATCTCCGGC GGCGTGAACA TCTACCCGCA GGAGACCGAG
GACGTGCTGC TGACCCATCC GGACGTCGCC GACGTCGCGG TGTTCGGCGT GCCCAATCCC
GAGATGGGCG AAGAGGTCAA AGCCGTGGTG CAGCTCCGGG ACGGCGCGGC TCCGAGCAGC
GAGCGAGCGG CCGAGCTGAT CGCGTTCTGC CGCGAGCGGC TGTCGCCGAT CAAGTGCCCG
CGTTCGGTCG ACTTCGAAGC CGAGCTGCCG CGCACCCCGA CCGGCAAGCT GGTCAAGCGC
CACCTCAAAG ACCGCTACTG GCCATCGCAG CAGAAGGCCG CCGCCGCGAC CGCCTGA
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| Protein sequence | MTHPSIHAKS NPDKVAYRMA STGQALTYRQ LDERSNQGAH LFRSLGLKAG DHIALLMENR
LAFMEICWAA QRAGLYYTAI SRYLTKDEIG YIVQDCGAKV VITSAQGSET MKSLLSDAPG
APLYYMVDPP TAGFRSWEQE TAAQPTTPIA DEVAGYDMLY SSGTTGRPKG IKREFEGNAI
DVPSPFLRLL CEKMCGMNVE SIYLSPAPLY HAAPLRFNMM ATTLGGTSII MEHFDAEQFL
ALVEKYKVTQ SQLVPTMFVR MLKLPDEVRC RYDVSSLKGA IHAAAPCPVD VKAKMIEWWG
PILIEYYAGS EGNGVTVSTS QQWLAHRGTV GKAVVGTIKI LDDEGEEQPV GEIGTVYFAD
APSFSYHNDP DKTKKAYNEK GWSTLGDVGY LDDEGFLYLT DRKSYMIISG GVNIYPQETE
DVLLTHPDVA DVAVFGVPNP EMGEEVKAVV QLRDGAAPSS ERAAELIAFC RERLSPIKCP
RSVDFEAELP RTPTGKLVKR HLKDRYWPSQ QKAAAATA
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