| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1900 |
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| Symbol | |
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| ID | 6409560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2045944 |
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| End bp | 2047416 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711786 |
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| Product | amidase |
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| Protein accession | YP_001990898 |
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| Protein GI | 192290293 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCGCCT CGCCCTGGAG CTTTGCCACC GTCACCGATC TTTCCGCCGC CCTGAAGGCC
AAGCAGGTCT CCGCCGTCGA ACTCACGCAG GACGCGATCG GACGGATCGA GCGGCACGAC
GACAAGGTCA ACGCGGTGTG CGTCCGCGAC TTCGACAGGG CGCTGCAGAG CGCGCGCGCA
GCCGACCTCG CGCTGTCGCG CGGCGGGCGC GAGCCGCTGC TCGGCATTCC GATGACCGTC
AAGGAGAGCT TCAACGTCGC CGGCCTGCCG ACCACCTGGG GTTTCGTCGA GCAGAAGAAC
TTCGTCGCTG CCGCCGATGC GCTGGCGGTC GAGCGGGTCA AGGCCGCGGG CGGCGTGATC
CTTGGCAAAA CCAACGTGCC GGTCGCACTC GGCGACTGGC AAAGCTACAA CGAGATCTAC
GGCACCACCG GCAATCCGTA TGATCTCGGC CGCACGCCGG GCGGATCGTC CGGTGGCTCC
TCGGCCGCCC TGGCCGCAGG CTTCGGCGCG CTGTCGCTCG GCTCGGATAT CGGCGGCTCG
CTGCGGGTGC CGGCGCATTA CTGCGGCGTC TACGCCCACA AGCCGACCTT CGGCCTGTGC
CCGGCACGCG GCCACACGCC GCCGCCGTTC CCGCCGCTGC CGTCCAATCG CGATCTGTCG
GTGATCGGCC CGATGGCGCG CTCGGCCGCC GATCTGGCGC TGCTGCTCGA CGTCATCGCC
GGCACCGATC CGATCTTCGA CGGCATCGCC TATCAGCTCG ATCTGCCGGC GGCACGGCAC
ACCGCGCTGA AGGACTTCCG CGTGCTGCTG CTGGATACGC ATCCGCTGCT GCCGACCGGC
GCGGCCGTAC ACAGCGCACT GCAGACGCTG GCGGACGGCC TGACCAAGGC CGGCGCGAGC
GTCACCCGCT CCTCGCCGCT GCTGCCGGAT CTCGCCGAGA CCTCGCGGGT CTATATGCGG
ATGCTGCTGT CGTTCCTCGC CGCCGGCTTC CCCGCCGATC TCTATGCCGG CGCGCAGGCG
ATGGCAGCCG GACTCAGTGC CACCGACGAC AGCCTCGCTG CGGAGCGGCT GCGCGGTATC
GTGCTCAGCC ACCGCGACTG GGTGGCCGCC GACAGCCGCC GCACCGGTTT GCGCGCGCAG
TGGCGCGAGC TGTTCAAATC GTTCGACGCG GTGATCTGCC CGGTGATGCC GACGCCTGCC
TATCCGCACG ACCACCACGA GCCGCAGGAA GAGCGCCGCA TCCTGATCGA CGGCAAGCCG
CATCCTTACG TCGATCAGTT GGTGTGGCCC GGCATCGCCA CCCTGCCCGG CCTGCCGTCG
ACCGCGCTGC CGATCGCGAT GTCGGACGAC GGCCTGCCGA TCGGCGTGCA GATCGTCGGC
CCGTGGCTGG AAGACCGCAC GCCGCTCAAG CTCGCCGAGT TGATCGAGCG CGAATTCGGC
GGCTTCAAAC CGCCGAAGGC ACTCGTCGAT TAG
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| Protein sequence | MPASPWSFAT VTDLSAALKA KQVSAVELTQ DAIGRIERHD DKVNAVCVRD FDRALQSARA
ADLALSRGGR EPLLGIPMTV KESFNVAGLP TTWGFVEQKN FVAAADALAV ERVKAAGGVI
LGKTNVPVAL GDWQSYNEIY GTTGNPYDLG RTPGGSSGGS SAALAAGFGA LSLGSDIGGS
LRVPAHYCGV YAHKPTFGLC PARGHTPPPF PPLPSNRDLS VIGPMARSAA DLALLLDVIA
GTDPIFDGIA YQLDLPAARH TALKDFRVLL LDTHPLLPTG AAVHSALQTL ADGLTKAGAS
VTRSSPLLPD LAETSRVYMR MLLSFLAAGF PADLYAGAQA MAAGLSATDD SLAAERLRGI
VLSHRDWVAA DSRRTGLRAQ WRELFKSFDA VICPVMPTPA YPHDHHEPQE ERRILIDGKP
HPYVDQLVWP GIATLPGLPS TALPIAMSDD GLPIGVQIVG PWLEDRTPLK LAELIEREFG
GFKPPKALVD
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