| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1889 |
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| Symbol | |
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| ID | 6409549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2037168 |
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| End bp | 2038403 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711778 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001990890 |
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| Protein GI | 192290285 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCAG CTCAGCTCAG CGCGTTTCAG CGCTGGTCGA TCCTGATCGG CGCGTCGGTG
CTGCTCAGCC TCGCCATGGG CATGCGGCAA AGTTTCGGGC TGTTTCAGCC CTCGGTGATC
CGCGATGTCG GTATCACCAG CGCTGACTTC TCCTTTGCCA CAGCGCTGCA GAACATCATC
TGGGGTGTCA CGCAGCCGAT GGTGGGACTG ATCGCCGACC GCTACGGCAC CCGCTGGGTG
ATGGCGGGCG GTGTGGTCGT CTATGCGGCC GGTCTGGTTC TCATGATGGT TGCGGACTCG
GCGCTGATGT TCACGTTGGG CTGTGGTGTC TGTGTCGGCA TTGCGCTGTC CTGCACCGCC
TCCAGCATGA CCATGACGGT GACCTCGCGC ACGGTATCGC CGGCCAAGCG CAGCGTCGCG
ATGGGGGCGG TCTCGGCGGC CGGGTCGCTC GGCCTGGTGC TGGCCTCGCC GCTGGCGCAG
ACGCTGATCT CGACCGCCGG CTGGCAGATG GCGCTGATCG GCTTTCTCGG CCTTGCCGCG
GCGATGTTGC CGTCGGCGCT GTTCGCCGGT CGTGCCGACA AGCTCGACAT CGACAAGTCG
GACGACGTGC AGCAGTCGGC CGGCGAGGTG GTACAGACCG CGCTCGGCCA TTCCGGCTTC
CTGGTGATGG CGATCGCGTT CTTCGTCTGC GGTCTGCAGC TCGTGTTCAT CACCACGCAT
CTGCCGAACT ATCTGGCGAT CTGCGGCCTC GATCCGTCGC TCGGCGCGTC CGCTCTGGCG
GTGATCGGGC TGTTCAACGT GTTCGGCTCG TATGCGTTCG GCTGGCTCGG CGGTAAGTTT
CCGAAGCAGT ATTTGCTCGG CGGCATCTAC ATCGTGCGGT CGTTGACGGT CGCGGCGTAT
TTCTATTTCC CGGCGTCAGC GACTTCGACG ATCGTGTTCG CCGCGATCAT GGGATCGTTG
TGGCTCGGGG TGATTCCGCT GGTGAACGGC CTGGTCGCCC AGTTGTTCGG CCTGCGCTAC
ATGGCGACGC TAACCGGCAT CGCCTTCCTC AGCCATCAGG TCGGCTCGTT CCTCGGGGCC
TGGGGCGGCG GCGTGATCTA CGACCATCTC GGCAGCTATG ATCGCGCTTG GCAGGCTGCG
GTGCTGATCG GCCTGATCGC CGGTTGTGCC CAGATGCTGA TGAACGTTCG GCCGCCACGC
CGCCGGGACG AATTGGCTGT GCCTGCCACC GCCTGA
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| Protein sequence | MKAAQLSAFQ RWSILIGASV LLSLAMGMRQ SFGLFQPSVI RDVGITSADF SFATALQNII
WGVTQPMVGL IADRYGTRWV MAGGVVVYAA GLVLMMVADS ALMFTLGCGV CVGIALSCTA
SSMTMTVTSR TVSPAKRSVA MGAVSAAGSL GLVLASPLAQ TLISTAGWQM ALIGFLGLAA
AMLPSALFAG RADKLDIDKS DDVQQSAGEV VQTALGHSGF LVMAIAFFVC GLQLVFITTH
LPNYLAICGL DPSLGASALA VIGLFNVFGS YAFGWLGGKF PKQYLLGGIY IVRSLTVAAY
FYFPASATST IVFAAIMGSL WLGVIPLVNG LVAQLFGLRY MATLTGIAFL SHQVGSFLGA
WGGGVIYDHL GSYDRAWQAA VLIGLIAGCA QMLMNVRPPR RRDELAVPAT A
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