Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1887 |
Symbol | |
ID | 6409547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2034948 |
End bp | 2035388 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711776 |
Product | hypothetical protein |
Protein accession | YP_001990888 |
Protein GI | 192290283 |
COG category | [S] Function unknown |
COG ID | [COG4731] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTTC GGTCTGGTTT TGTCGTTGCT GCCCTGGTTG CCCTCGCGCT GTCGCCCACA GGGGCGATCG CCCAATCGGC CGGTCCGCAG GGCACCTGGT TGACCCAGGC CGGCGACGCC AAGGTCCGGA TCAAGAGCTG CGGCAACGCG CTGTGCGGTA GCATCGTCTG GCTGAAGACA CCGATCGACC CAAATACCGG TAAGCCGCAG GTCGACGACA AGAACGGCGA TCCGCAGCTC GCCTCGCGGC CGATCATCGG CCTGCAGATC TTCGGCGACA TGCGCCCGGT GTCGCAGGGC AAATGGTCCG GCCACATCTA CAATGCCGAC GACGGCAAGA CCTATGAGAG CAGCATCTCG CACACCGGCC CGACCAGCCT GCGGGTCGAG GGCTGCGTCG GCACCCTGTG CGGCGGCGAA ACCTGGACGC TGACGCGCTA A
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Protein sequence | MAVRSGFVVA ALVALALSPT GAIAQSAGPQ GTWLTQAGDA KVRIKSCGNA LCGSIVWLKT PIDPNTGKPQ VDDKNGDPQL ASRPIIGLQI FGDMRPVSQG KWSGHIYNAD DGKTYESSIS HTGPTSLRVE GCVGTLCGGE TWTLTR
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