Gene Rpal_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1887 
Symbol 
ID6409547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2034948 
End bp2035388 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content66% 
IMG OID642711776 
Producthypothetical protein 
Protein accessionYP_001990888 
Protein GI192290283 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTTC GGTCTGGTTT TGTCGTTGCT GCCCTGGTTG CCCTCGCGCT GTCGCCCACA 
GGGGCGATCG CCCAATCGGC CGGTCCGCAG GGCACCTGGT TGACCCAGGC CGGCGACGCC
AAGGTCCGGA TCAAGAGCTG CGGCAACGCG CTGTGCGGTA GCATCGTCTG GCTGAAGACA
CCGATCGACC CAAATACCGG TAAGCCGCAG GTCGACGACA AGAACGGCGA TCCGCAGCTC
GCCTCGCGGC CGATCATCGG CCTGCAGATC TTCGGCGACA TGCGCCCGGT GTCGCAGGGC
AAATGGTCCG GCCACATCTA CAATGCCGAC GACGGCAAGA CCTATGAGAG CAGCATCTCG
CACACCGGCC CGACCAGCCT GCGGGTCGAG GGCTGCGTCG GCACCCTGTG CGGCGGCGAA
ACCTGGACGC TGACGCGCTA A
 
Protein sequence
MAVRSGFVVA ALVALALSPT GAIAQSAGPQ GTWLTQAGDA KVRIKSCGNA LCGSIVWLKT 
PIDPNTGKPQ VDDKNGDPQL ASRPIIGLQI FGDMRPVSQG KWSGHIYNAD DGKTYESSIS
HTGPTSLRVE GCVGTLCGGE TWTLTR