Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1886 |
Symbol | |
ID | 6409546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2033788 |
End bp | 2034951 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642711775 |
Product | hypothetical protein |
Protein accession | YP_001990887 |
Protein GI | 192290282 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGG GCGATAGCGG CGGATTCTAT CAGAGTGTCG CAGTGTTTCG CGGCTTCCGC AGCCTGATGG ATCCTGCTCT CTACGCGCCG CTGCCGGACG ATTGGACCAT CGGCGTCGCC GACATCGTCG ATTCCACCCG CGCGATCGCC GAGCAGCGCT ACAAGTCGGT CAACATGGCT GGCGCGGCCG TGATCGCGGC TGTGACCAAC GCGCTGCAAG GGCGCGAATT TCCGTTCGTG TTCGGCGGCG ACGGCGCCGG CTTAGCGGTG GCGCCGGCCG ATCTGGTGGC CGCCCGCGAT GCGCTGGCGG CGACGGCGGC CTGGGTTCGC GACGAGCTCG GCCTGACGAT GCGGATCGCG CTGGTGCCGG TCGCTGCGAT CCGCGCCAAG GGACTCGAGG TTCGCGTCGC CCGGTTCGCG CCTTCGCCGC ACGTCAGCTA CGCGATGTTC GCCGGCGGCG GTCTCGGCTG GGCCGAAGCG GCGATGAAGC GCGGCGAGTT TTCGATTCCG CCGGCGCCGC CTGGCACCGT GCCGGACCTC TCCGGCCTGT CGTGCCGGTT CGAGGAAATG CCGGCCCGGC GCGGCGTGAT CCTGTCGGTG CTGATCATGC CGACGGCGCA GGCCGATCCA GCGGCATTCC GCATTTTGAT CGAAGACATC GTGTCGCTGA TCGAGCGCAG CCCGGAGGCG GGCAGGCCGG TGCCGAGTGA GGGCCCGCGG CTGCGCTGGC CGCCGCAGGG CTTCGAGCTG GAAGCGCGCG CCGAGCGCGG CGGATCGCTG ACGCTGCGCC GCGCGGCGCT GCTGGTTCGG ACGCTGTTCA GCTATCTGAT CATGCGGCTC GGCATCACCG TGCGCGGTTT CGTGCCGCGC GCTTACTTGA CCGAGCTGGT CGAGAATTCA GACTTCCGTA AATACGACGA CGGACTGCGC ATGGTGGTCG ACTGCGCGCC GGAGCTCGCC GACGCGCTGG AGCAGAAGCT GGCCACGGCG GCGGCCGCAG GCGTTGCGCG CTACGGCGTG TCGCGGCAGC AGTCGGCGAT GGTGACGTGT TTTACGCCGT CGGTGACGCG CAGCGATCAC GTCCACTTCA TCGACGGGGC GGGCGGGGGC TATGCGTCCG CCGCCCTGGC TTTGAAGGCG ATGCCCGATA GGGCGGTCGC TTAG
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Protein sequence | MSAGDSGGFY QSVAVFRGFR SLMDPALYAP LPDDWTIGVA DIVDSTRAIA EQRYKSVNMA GAAVIAAVTN ALQGREFPFV FGGDGAGLAV APADLVAARD ALAATAAWVR DELGLTMRIA LVPVAAIRAK GLEVRVARFA PSPHVSYAMF AGGGLGWAEA AMKRGEFSIP PAPPGTVPDL SGLSCRFEEM PARRGVILSV LIMPTAQADP AAFRILIEDI VSLIERSPEA GRPVPSEGPR LRWPPQGFEL EARAERGGSL TLRRAALLVR TLFSYLIMRL GITVRGFVPR AYLTELVENS DFRKYDDGLR MVVDCAPELA DALEQKLATA AAAGVARYGV SRQQSAMVTC FTPSVTRSDH VHFIDGAGGG YASAALALKA MPDRAVA
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