Gene Rpal_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1886 
Symbol 
ID6409546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2033788 
End bp2034951 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID642711775 
Producthypothetical protein 
Protein accessionYP_001990887 
Protein GI192290282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG GCGATAGCGG CGGATTCTAT CAGAGTGTCG CAGTGTTTCG CGGCTTCCGC 
AGCCTGATGG ATCCTGCTCT CTACGCGCCG CTGCCGGACG ATTGGACCAT CGGCGTCGCC
GACATCGTCG ATTCCACCCG CGCGATCGCC GAGCAGCGCT ACAAGTCGGT CAACATGGCT
GGCGCGGCCG TGATCGCGGC TGTGACCAAC GCGCTGCAAG GGCGCGAATT TCCGTTCGTG
TTCGGCGGCG ACGGCGCCGG CTTAGCGGTG GCGCCGGCCG ATCTGGTGGC CGCCCGCGAT
GCGCTGGCGG CGACGGCGGC CTGGGTTCGC GACGAGCTCG GCCTGACGAT GCGGATCGCG
CTGGTGCCGG TCGCTGCGAT CCGCGCCAAG GGACTCGAGG TTCGCGTCGC CCGGTTCGCG
CCTTCGCCGC ACGTCAGCTA CGCGATGTTC GCCGGCGGCG GTCTCGGCTG GGCCGAAGCG
GCGATGAAGC GCGGCGAGTT TTCGATTCCG CCGGCGCCGC CTGGCACCGT GCCGGACCTC
TCCGGCCTGT CGTGCCGGTT CGAGGAAATG CCGGCCCGGC GCGGCGTGAT CCTGTCGGTG
CTGATCATGC CGACGGCGCA GGCCGATCCA GCGGCATTCC GCATTTTGAT CGAAGACATC
GTGTCGCTGA TCGAGCGCAG CCCGGAGGCG GGCAGGCCGG TGCCGAGTGA GGGCCCGCGG
CTGCGCTGGC CGCCGCAGGG CTTCGAGCTG GAAGCGCGCG CCGAGCGCGG CGGATCGCTG
ACGCTGCGCC GCGCGGCGCT GCTGGTTCGG ACGCTGTTCA GCTATCTGAT CATGCGGCTC
GGCATCACCG TGCGCGGTTT CGTGCCGCGC GCTTACTTGA CCGAGCTGGT CGAGAATTCA
GACTTCCGTA AATACGACGA CGGACTGCGC ATGGTGGTCG ACTGCGCGCC GGAGCTCGCC
GACGCGCTGG AGCAGAAGCT GGCCACGGCG GCGGCCGCAG GCGTTGCGCG CTACGGCGTG
TCGCGGCAGC AGTCGGCGAT GGTGACGTGT TTTACGCCGT CGGTGACGCG CAGCGATCAC
GTCCACTTCA TCGACGGGGC GGGCGGGGGC TATGCGTCCG CCGCCCTGGC TTTGAAGGCG
ATGCCCGATA GGGCGGTCGC TTAG
 
Protein sequence
MSAGDSGGFY QSVAVFRGFR SLMDPALYAP LPDDWTIGVA DIVDSTRAIA EQRYKSVNMA 
GAAVIAAVTN ALQGREFPFV FGGDGAGLAV APADLVAARD ALAATAAWVR DELGLTMRIA
LVPVAAIRAK GLEVRVARFA PSPHVSYAMF AGGGLGWAEA AMKRGEFSIP PAPPGTVPDL
SGLSCRFEEM PARRGVILSV LIMPTAQADP AAFRILIEDI VSLIERSPEA GRPVPSEGPR
LRWPPQGFEL EARAERGGSL TLRRAALLVR TLFSYLIMRL GITVRGFVPR AYLTELVENS
DFRKYDDGLR MVVDCAPELA DALEQKLATA AAAGVARYGV SRQQSAMVTC FTPSVTRSDH
VHFIDGAGGG YASAALALKA MPDRAVA