| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1876 |
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| Symbol | |
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| ID | 6409535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2017387 |
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| End bp | 2018637 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711764 |
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| Product | response regulator receiver modulated diguanylate phosphodiesterase |
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| Protein accession | YP_001990877 |
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| Protein GI | 192290272 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.296132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGATC CAACCAACCA TAATCCGGCG ATCGATGTTC TGGTCGTCGA CGATGATCCG
GTTCAGGGGG CGATCGTCAG CGGTGTCTGC ACCAAGCTCG GTTACCGCCC GCATTTTGCC
TCGTCCTATC ATGAAGCGGC CGCGCGTCTC GCGACTGGCC GGTTCGATTA CATCACGATC
GATCTGTCGC TCGGCGATCA CGACGGCATC GAACTGTTGC GGCTGATCGC GGAGACCGAG
GCCAAGCCGC GTCGGATCAT CGTGATCAGC GGTTGTGAAG AGCGCATCCT CAATGCCACG
GTGCGGATGG CCCACGCCGT CGGGATGCTC GACACCATTT CGCTGCCGAA GCCGATCGAT
CTCGCTCTGC TCCGCGGTGC GCTGGCGCCG TTCCAGGAAG CCGCGGCGTC GCGGCGCGGA
GTGGATTCGC GCCTGTCCGA GATCACCGCC GACGATCTGC GCCGCGGTCT CGACCGTGGT
GAAGTCTATG CCGCGTTTCA GCCGAAGATC GATCTTTCCA CCGGCAAGGT CACCGGCTGC
GAAGCGCTGG CGCGCTGGGA CAGCGCAACG TTCGGTCCGG TCGGCCCGGA TGTCTTCATT
CCGCTCGCCG AGCAGGGCGG GCTGATCAAG ACGATGACGC TGCGGATGCT GCGCGACTCG
ATGACGTTCG CTGCCGCGTT CCTTCCGACC GAGCCGAAAT TCGTCGTGGC GGTCAATCTG
TCGGCCACGC TGCTGTCCGA CACCTCGCTG CCGGAGGAGG TCGAGCGCCT GCTTGCGGAG
ATCGGCGTAC CGGCTCGGTC GCTGATGATC GAGGTCACCG AGACCACCGC AATGGCCGAT
GTCGGCCGCG CCATGGACGT GTTGCTGCGG CTTCGCCTCA AGGGCATCGG CATCTCGATG
GACGATTTCG GCACCGGCTA TTCGTCGCTG TCGGCGCTGG CGCGGATGCC GTTCAGCGAA
TTGAAGATCG ATCGCTCGTT CGTCAAGGAC TGCCTGACCG ACGCCGACAT GTGGAAGATC
GTGTCGTCCT CGGTCGCGAT CGCGCATCAG TACAACATGA AGGTCGTGGC CGAAGGCATC
GAGGATGCTG CGACCTGGCA CGCCCTCGAT GCGCTCGGCT GTGATATCGG CCAGGGCTTC
GAGTTCTCGC GTGCGCTGCG CCAGGATGCC TTCGTCGAAT GGTACCACGG CTGGATGGCG
CGTCCGCCGG CCACGCGGGC GGCCGTCGTG CCGCTGCAGC GCGAGGCCTG A
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| Protein sequence | MVDPTNHNPA IDVLVVDDDP VQGAIVSGVC TKLGYRPHFA SSYHEAAARL ATGRFDYITI
DLSLGDHDGI ELLRLIAETE AKPRRIIVIS GCEERILNAT VRMAHAVGML DTISLPKPID
LALLRGALAP FQEAAASRRG VDSRLSEITA DDLRRGLDRG EVYAAFQPKI DLSTGKVTGC
EALARWDSAT FGPVGPDVFI PLAEQGGLIK TMTLRMLRDS MTFAAAFLPT EPKFVVAVNL
SATLLSDTSL PEEVERLLAE IGVPARSLMI EVTETTAMAD VGRAMDVLLR LRLKGIGISM
DDFGTGYSSL SALARMPFSE LKIDRSFVKD CLTDADMWKI VSSSVAIAHQ YNMKVVAEGI
EDAATWHALD ALGCDIGQGF EFSRALRQDA FVEWYHGWMA RPPATRAAVV PLQREA
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