Gene Rpal_1873 details

Gene Information

• Locus tag: Rpal_1873
• ID: 6409532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2015403
• End bp: 2015903
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642711761
• Product: CheW protein
• Protein accession: YP_001990874
• Protein GI: 192290269
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0835] Chemotaxis signal transduction protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.101354
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGA CCAGGAAGGA CACCCCCGCG ATGAGCCGCA CCATCGACGC GATCAGCGGC 
AACACCACCC AGTTCGCCAC CGCGATGATC GGCGGGCAGC TGTTCGGGCT GCCGATCAGC 
CGGGTGCAGG ACGTGTTCAT GCCGGAACGG CTGACCCGGG TGCCGCTGGC GCCGGACGAC 
GTCGCCGGCG TTCTCAACCT GCGCGGCCGG ATCGTCACCG CGATCGACAT GCGGGCCCGT 
CTCGGCCTAC CGAAGAACCA GGACGGCAAG CCGCCGATGG CGATGGGCGT CGACCTGCGC 
GGCGAATCCT ACGGCCTGCT GATCGACTCC ATCGGCGAAG TGCTGACCCT GCCGGACGAG 
GGCCGCGAGA CCAACCCGGT CAACCTCGAT CCCCGCATGG CCTCCTTCGC CAACGGCGTC 
CACCGCCTCG ACGGACAGCT CATGGTCGTC CTCGATGTCG ACAAAGTGCT CGAAATCGCA 
ACTCAACGTA TGGCTGCTTG A 

 

Protein sequence

MSETRKDTPA MSRTIDAISG NTTQFATAMI GGQLFGLPIS RVQDVFMPER LTRVPLAPDD 
VAGVLNLRGR IVTAIDMRAR LGLPKNQDGK PPMAMGVDLR GESYGLLIDS IGEVLTLPDE 
GRETNPVNLD PRMASFANGV HRLDGQLMVV LDVDKVLEIA TQRMAA