Gene Rpal_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1868 
Symbol 
ID6409527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp2005558 
End bp2006208 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content61% 
IMG OID642711756 
Producttransport-associated 
Protein accessionYP_001990869 
Protein GI192290264 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.882392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAGT CCCAGCTTCG TCAAAACATC CTTGACGAGT TCGAATTCGA TCCGAGCTTC 
AACAGCGGCC ACATCAAGGT TGCTGTCGAA ACCGACAGAG TGATCCTCAG TGGTCACGTT 
ATGAGCTATG CGGACAAGGT CGCAGCGATC GCTGCGACCC GCCGCGTCAA AGGCGTGCAC 
GCGATCACCG ACCACCTCGA AGTCCGCTCG CCGTTCAATC GAACCGCCGA CGATCAGATC 
GCACAGCGCG CCTGCGACCT CCTTGAATGG AACGTGCTTG TTCCGTCGAG CTCGGTCGAC 
GTCCAGGTCG AGAACGGGTG GCTGACGCTG AGCGGCACGG TGGATTGGCA CTTCGAACGC 
GCCGCCGCCG AAGACGATGT CCGCAAGCTC GCCGGCGTGA TGGGCGTCAC CAACAACATC 
GTCATCAACA ATCCACTCGC CGATCATTCC TGCATCCGCG ACAAGATCGA GTCGGCGCTG 
CGCCGCCACG CCGAGATCGG ATCGAAGACC ATCCGTGTCA CGGTGAAGAA CGGCAACATC 
GTGATCCTGG AAGGCCGGGT CGACACCTGG GACGAACGTC GCGCGGCGCA AAATGCCGCA 
TGGTCGACTC CGGGCGTAGC AGCGGTCGAT GACCGTCTGA TGATCAACTG A
 
Protein sequence
MSESQLRQNI LDEFEFDPSF NSGHIKVAVE TDRVILSGHV MSYADKVAAI AATRRVKGVH 
AITDHLEVRS PFNRTADDQI AQRACDLLEW NVLVPSSSVD VQVENGWLTL SGTVDWHFER 
AAAEDDVRKL AGVMGVTNNI VINNPLADHS CIRDKIESAL RRHAEIGSKT IRVTVKNGNI 
VILEGRVDTW DERRAAQNAA WSTPGVAAVD DRLMIN