Gene Rpal_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1864 
Symbol 
ID6409523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2000824 
End bp2002521 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content62% 
IMG OID642711752 
Productmagnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 
Protein accessionYP_001990865 
Protein GI192290260 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.599667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCATCC TTCTCATTCA CCCGAATTAT CATTCCGGTG GCGCGGAGAT CGCCGGCCAC 
TGGCCGCCGG CATGGGCCCC CTATCTGGCA GGCGCGCTGA AGGCGAACGG ATTCGCCGAC
ATCAAATTCG TCGATGCGAT GACCGAGGAG ATCTCCAACG AAGGTCTCGC CAAGATCATC
TCCGACTATC AGCCCGACCT GGTCGGCGCC ACATCGATCA CCCCCTCGAT CTACGCGGCC
GAAGAAGCAC TGAAGGTCGC CAAGCAGGTC AACCCGAAGA TCGTCACCAT GCTGGGCGGC
GTGCATGCGA CCTTCATGTA TCAGCAGGTG CTGAGCGAAG CGCCGTGGGT CGACGTGATC
GTCCGCGGCG AAGGCGAAGA GATCGTCGTC GAGCTGGCGC GCGCCGTTGC CTCGGGCAAC
TGGCCGGCGA ACCGCTCCGA GATCAAGGGC CTCGCCTACA CCGAAGGCTC CAACGGCGAG
AGCCAGATCG TCGCCACCGC GGCGGCTCCG ACGGTCAAGG ACCTCGACGC CATCAAGCCG
GACTGGGGCG TACTAAACTG GAATCTGTAT CGCTACATTC CGATGAACAC CCGCGTGGCG
ATCCCGAACA TGGCGCGCGG CTGTCCGTTC ACCTGTTCGT TCTGCTCGCA GTGGAAATTC
TGGCGCGACT ACCGCGTCCG CGATCCGAAG AAGGTGGTCG ACGAGATCCA GGAGCTGGTC
GAGAAGTATG ACGTCGGCTT CTTCATCCTC GCCGACGAAG AACCCACCAT CAACCGCAAG
AAGTTCATCC AGTTCTGCGA AGAGCTGATC GCTCGCGGCC TGAACAAGAA GGTGCAGTGG
GGCATCAACA CCCGCGTCAC CGACATCCTG CGCGACGAGC AGCTGCTGAA ATTCTACAAC
GAAGCCGGCC TGATGCACGT CTCGCTCGGC ACCGAAGCGG CGGCTCAGCT CAAGCTCGAC
CTGTTCAACA AGGAGACCAA GATCTCCGAC AACAAGAAGG CGATCCGCCT GCTCCGCGAA
GCCGGCATCG TCGTCGAAGC CCAGTTCATC GTCGGCCTCG ACTCCGAGAC CCCGGAGACG
CTGGAAGAAA CCTACCGCAT GGCGATGGAC TGGAAGCCGG ACCTCGCCAA CTGGTCGATG
TACACCCCGT GGCCGTTCAC ACCGCTGTTC AAGGAACTGT CCGACAAGGT CGAGGTGTTC
GACTTCGCCA AGTACAACTT CGTCACGCCG ATCGTGAAGC CGGCGGCGAT GGAGCGCGGC
GAACTGCTCG ACCGGGTGAT GAACAACTAT CGCCGCTTCT ACATGTACAA GGCGTTCTTC
TCGTATCCCT GGTCGGGAAC GGGACGCCGG CGTCGCTACC TGCTGGGCTG CCTGAAGGCG
TTCCTCAAGG CCGGCTTCGA GCGCAAGTTC TACGACCTCG GCCGCGTCGG CTATTGGGGT
CCGCAGTCGA AGAAGAAGGT CGACTTCCAG TTCGACACCA CCCGCAAGAT CTCGCACGCG
CAGATGGCGG ACTGGGAAGC CAACGCCGAC CGCTCCCGCA AGGCCGCCGC CTCTCAGATG
GCGATCGTCT CGGCCTGCGG CGGTGGTACC GATCAGATGG AAGAGAGCGA AGCCGATGCC
AAGGCGGCGC TCGCCAAGAC CGTAACCAGC CGCGTGGCGG ACAGCACCCA TGACGCAGGT
TCGGTCACCC GTCACTGA
 
Protein sequence
MRILLIHPNY HSGGAEIAGH WPPAWAPYLA GALKANGFAD IKFVDAMTEE ISNEGLAKII 
SDYQPDLVGA TSITPSIYAA EEALKVAKQV NPKIVTMLGG VHATFMYQQV LSEAPWVDVI
VRGEGEEIVV ELARAVASGN WPANRSEIKG LAYTEGSNGE SQIVATAAAP TVKDLDAIKP
DWGVLNWNLY RYIPMNTRVA IPNMARGCPF TCSFCSQWKF WRDYRVRDPK KVVDEIQELV
EKYDVGFFIL ADEEPTINRK KFIQFCEELI ARGLNKKVQW GINTRVTDIL RDEQLLKFYN
EAGLMHVSLG TEAAAQLKLD LFNKETKISD NKKAIRLLRE AGIVVEAQFI VGLDSETPET
LEETYRMAMD WKPDLANWSM YTPWPFTPLF KELSDKVEVF DFAKYNFVTP IVKPAAMERG
ELLDRVMNNY RRFYMYKAFF SYPWSGTGRR RRYLLGCLKA FLKAGFERKF YDLGRVGYWG
PQSKKKVDFQ FDTTRKISHA QMADWEANAD RSRKAAASQM AIVSACGGGT DQMEESEADA
KAALAKTVTS RVADSTHDAG SVTRH