Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1860 |
Symbol | |
ID | 6409519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1997509 |
End bp | 1998051 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711748 |
Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_001990861 |
Protein GI | 192290256 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.715022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCC AGCAGATCCA TCACGTCGCC TATCGCTGCA AGGACGCCAA GGAAACCGTC ACGTTCTACG GACGAGTGAT GGGCATGGAG CTGATCGGCG CGATCGCCGA AGACAAAGTG CCGTCGACCA AGGCGCCCGA TCCCTACATG CACATCTTCC TCGACGCCGG CGCCGGCAAC ATCCTGGCGT TCTTCGAGTT GCCGAACTCG CCGCCGATGG GCCGCGATCC GAACACCCCA GACTGGGTCC AGCACATCGC CTTCCAGGTC GATGACGTCG ACACGTTGAT GGCGGCGAAG CAGCGTGCCG AAGCCGAGGG GCTCGAAGTG ATCGGTCCGA CCGATCACAC CATCTTCAAG TCGATCTACT TCCGCGATCC CAGCGGCCAT CGGCTCGAAG TGGCAGCCTG GACCGCAACG CCGGAGCAGC TTGCCCAGAT GAGGAGCGTC GCTCATGCGA TGGTCGACGA ATGGGCGGTG ACCAAGAAGC CGCCGCGCCA CACCGCGTGG CTGCACCAGA AGGAATTCGC CGACGCCGAA TAG
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Protein sequence | MQIQQIHHVA YRCKDAKETV TFYGRVMGME LIGAIAEDKV PSTKAPDPYM HIFLDAGAGN ILAFFELPNS PPMGRDPNTP DWVQHIAFQV DDVDTLMAAK QRAEAEGLEV IGPTDHTIFK SIYFRDPSGH RLEVAAWTAT PEQLAQMRSV AHAMVDEWAV TKKPPRHTAW LHQKEFADAE
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