Gene Rpal_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1860 
Symbol 
ID6409519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1997509 
End bp1998051 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID642711748 
ProductGlyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001990861 
Protein GI192290256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.715022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCC AGCAGATCCA TCACGTCGCC TATCGCTGCA AGGACGCCAA GGAAACCGTC 
ACGTTCTACG GACGAGTGAT GGGCATGGAG CTGATCGGCG CGATCGCCGA AGACAAAGTG
CCGTCGACCA AGGCGCCCGA TCCCTACATG CACATCTTCC TCGACGCCGG CGCCGGCAAC
ATCCTGGCGT TCTTCGAGTT GCCGAACTCG CCGCCGATGG GCCGCGATCC GAACACCCCA
GACTGGGTCC AGCACATCGC CTTCCAGGTC GATGACGTCG ACACGTTGAT GGCGGCGAAG
CAGCGTGCCG AAGCCGAGGG GCTCGAAGTG ATCGGTCCGA CCGATCACAC CATCTTCAAG
TCGATCTACT TCCGCGATCC CAGCGGCCAT CGGCTCGAAG TGGCAGCCTG GACCGCAACG
CCGGAGCAGC TTGCCCAGAT GAGGAGCGTC GCTCATGCGA TGGTCGACGA ATGGGCGGTG
ACCAAGAAGC CGCCGCGCCA CACCGCGTGG CTGCACCAGA AGGAATTCGC CGACGCCGAA
TAG
 
Protein sequence
MQIQQIHHVA YRCKDAKETV TFYGRVMGME LIGAIAEDKV PSTKAPDPYM HIFLDAGAGN 
ILAFFELPNS PPMGRDPNTP DWVQHIAFQV DDVDTLMAAK QRAEAEGLEV IGPTDHTIFK
SIYFRDPSGH RLEVAAWTAT PEQLAQMRSV AHAMVDEWAV TKKPPRHTAW LHQKEFADAE