Gene Rpal_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1857 
Symbol 
ID6409516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1995536 
End bp1995811 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content64% 
IMG OID642711745 
Productprotein of unknown function DUF156 
Protein accessionYP_001990858 
Protein GI192290253 
COG category[S] Function unknown 
COG ID[COG1937] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.151072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAG ACATCAAGGC GTCGTGTCAA AAACGGCTGG GCCGGATCGA AGGGCAGGTG 
CGCGGCATCT CCAAGATGGT GGAGGAGGGG CGCTACTGCA TCGACATCGT CACCCAGATC
TCAGCGGTCC GCGCCGCGCT GCGGCGGGTG GAGGAAGAGG TGCTGAAAGA TCACGTCGCG
CATTGCGTCG AGCACGCGAT CGCCAGCGGC GACAAAGCCG ACCAGCGCCA GAAGATCGCG
GAGCTGATGG ATGTGATCCA GCGCTCCGGC CGCTGA
 
Protein sequence
MHKDIKASCQ KRLGRIEGQV RGISKMVEEG RYCIDIVTQI SAVRAALRRV EEEVLKDHVA 
HCVEHAIASG DKADQRQKIA ELMDVIQRSG R