Gene Rpal_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1838 
Symbol 
ID6409497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1973949 
End bp1974950 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID642711726 
Productalpha/beta hydrolase fold 
Protein accessionYP_001990839 
Protein GI192290234 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.886983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGT TGATCTTGCT GGTGCTGAGC GTCGTCGTGC TGTTCACGGC GGCGGGCTGG 
GTCTCGTGCC GTCTGGCGCG CCGGCTGGAG GCGCGCTATC CGCCGCGCGG CGTGTTCATC
AATGCCAACG GCGTGCGGAT GCACGCGCTC GACTTATCGC CTGCACGTCC CGCCGCTTCC
GGCCAGCCGA CCGTCTTGCT GCTGCACGGC GCCAACCTGT GCTGCGAAGA TATGCGGATG
TCGCTGGGCG AGCGGCTGGC GCAGCGGCTG CGGGTGATCG TTCCGGACCG CCCCGGCCAG
GGCTACAGCG TCACCGGCAC AGGCCCGGTC GCCTCGCCGG CCTATCAGGT GACGTTGATC
CGCGAAGTGC TGCGCGATCG CGACGCCGGC CCGTTGATCG TGGTCGGGCA TTCGTTCGGC
GGCCTGATCG CGCTGCGCTA TGCGCTCGAC AATCCCGACA CCGTCGCCGG GCTCGTTCTG
ATCAATCCGA CCACCCATCC CCGACCGCAG GGCCTGCCGC TGTTCCAGCG TGCCGCCGAA
GTGCTGATGA AGCCGCTGGT CACCTACACA CTGCTGCCGC CGCTGTCGCT GGCGATGATG
AAGCGGATCT CGGCGCGGAT CTTCCGGCCG GAAACGCCGC CGGCGGACTA TGCCGAGCGC
AGCCGGCTGG CGCTGGCGCT GACCGCCAAG CGGTTCGCCG CCAGTCTGGA AGAGTATGCC
GGGCTGCGGG ATCAGCTGAT CGATCACGTG CCGCGCTATG GCGCCATCCA GGTGCCGACC
GTGATCGTCG CCGGCACCGC CGATCCGGTG GTACCGCCGC AGGTCCACGC CGAAGCGCTG
GCGCAGGCGG TGCCGCAGGC CAGGCTGCTG CGACTGAACG GCGCCGGCCA CATGGCGCAT
CATGCCCACG CCGACACCAT CGCAGCCGAG ATCGAGCGGC TGGCGGATGC GGTCGCGGAG
CGCGCCGCGC CGTCCCGTGC CGAAGCCGCC GAGCGCAGCT GA
 
Protein sequence
MTTLILLVLS VVVLFTAAGW VSCRLARRLE ARYPPRGVFI NANGVRMHAL DLSPARPAAS 
GQPTVLLLHG ANLCCEDMRM SLGERLAQRL RVIVPDRPGQ GYSVTGTGPV ASPAYQVTLI
REVLRDRDAG PLIVVGHSFG GLIALRYALD NPDTVAGLVL INPTTHPRPQ GLPLFQRAAE
VLMKPLVTYT LLPPLSLAMM KRISARIFRP ETPPADYAER SRLALALTAK RFAASLEEYA
GLRDQLIDHV PRYGAIQVPT VIVAGTADPV VPPQVHAEAL AQAVPQARLL RLNGAGHMAH
HAHADTIAAE IERLADAVAE RAAPSRAEAA ERS