| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1828 |
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| Symbol | flhA |
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| ID | 6409486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1962330 |
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| End bp | 1964462 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711715 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_001990829 |
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| Protein GI | 192290224 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.560177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACA CCACGGTCGG CCAGAGCACT GGGTCCGGCA TTCCCAGCCT CAACGAAATG
ATCGCCATAC TGCGGCGCGG CGACCTCGCG CTCGCGATCG GCGTGCTGAC TATCCTGGTC
GTGCTGATCC TGCCGCTGCC GGCGATCATT CTCGACCTGT TCCTGGCGAT CTCGATCACG
CTGTCGATCC TGATCCTGAT GACGTCGCTG TTCATCCAGG CGCCGCTGGA ATTCTCGTCG
TTCCCGACCG TGCTCCTGAT CTCGACGATG TTGCGGCTGT CGCTGAACAT GGCGTCGACC
CGGCTGATCC TGTCGCACGG CCATGAAGGC ACCGCGGCCG CCGGTCACGT CATCGAGGCG
TTCGGCGGCT TCGTGATGGG CGGCAATTTC GTCATCGGGA TCATCGTGTT CACGATCCTG
ATCATCGTCA ACTTCGTGGT CATCACCAAG GGTTCGGGCC GCATCGCCGA AGTCGCGGCG
CGTTTCCAAT TGGACTCGAT GCCCGGCAAG CAGATGGCGA TCGACGCCGA CCTGTCGGCC
GGCCTGATCG ACGAAGCCAC CGCCAAAGCG CGGCGCAAGG AGCTCGAAGA CGAAAGCGGC
TTCTTCGGCG CCATGGACGG TGCGTCGAAG TTCGTCCGCG GCGACGCCAT CGCCGGCCTC
TTGATCGTGT TTATCAACGT GATCGGCGGC ATCATCATCG GCGTCGCGCA GCAGGGCCTG
TCTTTCTCGG AAGCCGGGCA CACCTATACG CTGCTCACCG TCGGCGACGG CCTGGTCACT
CAGATCCCGG CGCTGATCGT GTCGACCGCG GCGGGCCTGC TGGTCTCGAA GGCCGGCATC
TCCGGCTCGG CCGACAAGGC GATGATGGGC CAGCTCTCCG GCTACCCGCA GGCGCTCGGC
ATGGCGGCCG CGGTGATGCT GGTGCTGGCG GTGCTGCCGG GCATTCCGAC CCTGCCGTTC
CTGGCGCTCG GCAGCGGCTC GGCCTACCTG GCCTTGAAGG CGCGCAACCG CAAACGGGAG
GTCACTGCCG AGGCGGCGCA GGCCGCAGCC GCGCCGGAAG CAGCCGCTGC CGCTGCGGCG
GCCGCTTCCG CGGCGGAGGA GCCGATCGCC GCAGCGCTGA AGATCGATGA TCTGAAGATC
GAGCTCGGCT ACGCGCTCTT GCCGCTGGTC AACGGCCCCG ACGGCCAGGA CCGCCTGACC
GAGCAGATCA AGGCGCTGCG CCGGTCGCTG GCGATCGAGA TGGGCTTCGT GATGCCGGCT
GTGCGCATCC TCGACAACGT CCAGCTCGAG GCCAACACCT ACGTCATCAA GATCAAGGAA
GTCGACGCCG GCACCGGCCG GATCTGGCCG AACCAGTTCA TGGTCATGGA CCCGGCCGGC
GAACAGGTGA CGGTGCCCGG CATTCACACC ACCGAGCCGA CCTTCGGCCT GCCCGCGACC
TGGGTCGACG CCAACTTCAA GGAAGAGGCG TCGCTGAAGG GCTACACCGT GGTCGACGCC
GCCACCGTGC TGTCGACGCA TCTGACCGAG CTGCTCAAGG CCAACATGTC CGACCTGTTG
TCCTATGGCG AAACCCAGAA GCTGCTCAAA GACCTGCCGA AGGAACAGGG CGAGCTGGTC
AAGGATATCG TCCCGGGTCA GATCACCGTC TCGGGCATCC AGCGCGTGCT CCAGCTGCTG
CTCGCCGAGC GCGTCTCGAT CCGCGACCTG TCGACCATCC TCGAAGGCAT CGCCGAAGCG
CTGGCGTTCT CGCGCAATCC GTCGACGATC GTCGAGCACG TCCGCGCCCG GCTGGCGCGC
CAGATCTGCG CGCAGAACAC CTCCTACAAC GGCTACCTGC CGCTGATCGC GCTGTCGGCG
AAGTGGGAGC AGGCGTTCGC CGAATCGATC ATCGGCCAGG GCGAAGACCG CACCCTGGCG
ATGGCGCCGT CGAAGCTGTC GGAATTCATG ACCGCGGTGC GCGACAAGTT CGAGCAGGCC
GCGCGCGAAG GCGAGGCCCC GGTGCTGGTG ACATCCGCCT CGATCCGGCC GTTCGTCCGC
TCGCTGGTCG AGCGCTTCCG CGCCCAGACC ACCGTGATGT CGCAGGCCGA GATCCATCCG
CGGGCGCGGC TGAAAACGGT CGGCAGCGTC TGA
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| Protein sequence | MTDTTVGQST GSGIPSLNEM IAILRRGDLA LAIGVLTILV VLILPLPAII LDLFLAISIT
LSILILMTSL FIQAPLEFSS FPTVLLISTM LRLSLNMAST RLILSHGHEG TAAAGHVIEA
FGGFVMGGNF VIGIIVFTIL IIVNFVVITK GSGRIAEVAA RFQLDSMPGK QMAIDADLSA
GLIDEATAKA RRKELEDESG FFGAMDGASK FVRGDAIAGL LIVFINVIGG IIIGVAQQGL
SFSEAGHTYT LLTVGDGLVT QIPALIVSTA AGLLVSKAGI SGSADKAMMG QLSGYPQALG
MAAAVMLVLA VLPGIPTLPF LALGSGSAYL ALKARNRKRE VTAEAAQAAA APEAAAAAAA
AASAAEEPIA AALKIDDLKI ELGYALLPLV NGPDGQDRLT EQIKALRRSL AIEMGFVMPA
VRILDNVQLE ANTYVIKIKE VDAGTGRIWP NQFMVMDPAG EQVTVPGIHT TEPTFGLPAT
WVDANFKEEA SLKGYTVVDA ATVLSTHLTE LLKANMSDLL SYGETQKLLK DLPKEQGELV
KDIVPGQITV SGIQRVLQLL LAERVSIRDL STILEGIAEA LAFSRNPSTI VEHVRARLAR
QICAQNTSYN GYLPLIALSA KWEQAFAESI IGQGEDRTLA MAPSKLSEFM TAVRDKFEQA
AREGEAPVLV TSASIRPFVR SLVERFRAQT TVMSQAEIHP RARLKTVGSV
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