| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1825 |
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| Symbol | |
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| ID | 6409483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1960105 |
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| End bp | 1960653 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711712 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001990826 |
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| Protein GI | 192290221 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0355081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGTCGC CGGCTGAGTT GGTTTCGCTG ATCGCCGCGG TCGCCGAGCG CGACCAGGAC
GCGTTCCAGC GACTCTACGA TGCGACGCGG GCGAAACTGT TCGGCGTCGT TCTTCGTATC
TTGCGGCGAC AGGATCTCGC CGAAGAAGTC ATTCAGGACG CCTACGTCAA GATCTGGAAC
AACGCTGCGC AGTTCGATTC CACGGTGGCC TCGCCGATCA CCTGGATGGC GTCGATCGCG
CGCAACCGGG CGATCGACGT CGCGCGCAAG CGGGGTGAAG TCTCGATCGA GGAAGAGCCG
TCCGCCAACG ACGTCGCGGC GGAGACGCCG GATCCGCTGG CGCGCCGCGA GATGACCGAG
GAATTGAAGC GGCTGCTGGA GTGCATCGGC CGTTTGGAGC CTGACCGCCA GAAGCTGGTT
CTGCTGGCTT ACTACAACGG CTGGAGCCGG GAGCAGCTCG GCGCCAAGTT TGGCGCTCCG
GCTAATACGA TCAAGACCTG GCTGCGCCGC AGCCTGCTCG ATGTTCGGGG GTGTTTGGGA
CTGACCTGA
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| Protein sequence | MLSPAELVSL IAAVAERDQD AFQRLYDATR AKLFGVVLRI LRRQDLAEEV IQDAYVKIWN
NAAQFDSTVA SPITWMASIA RNRAIDVARK RGEVSIEEEP SANDVAAETP DPLARREMTE
ELKRLLECIG RLEPDRQKLV LLAYYNGWSR EQLGAKFGAP ANTIKTWLRR SLLDVRGCLG
LT
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