| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1822 |
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| Symbol | |
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| ID | 6409480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1956997 |
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| End bp | 1957698 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642711709 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001990823 |
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| Protein GI | 192290218 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.077619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTAT TGCTGATTGA AGATGACAGC GCCACTGCGC AGTCGATCGA ATTGATGCTC
AAATCCGAGA GTTTCAATGT CTACACGACG GATCTCGGAG AAGAAGGCGT CGACCTCGGC
AAGCTGTACG ACTACGACAT CATCCTGCTT GATCTGAACC TGCCGGACAT GTCCGGCTAT
GACGTTCTCA AGCAGCTGCG CGTCTCCAAG ATCAAAACCC CGATCCTGAT CCTGTCCGGC
CTCGCCGGCA TCGAGGACAA GGTGAAGGGC CTGGGCGTCG GTGCCGACGA CTACATGACC
AAGCCGTTCC ACAAGGACGA GCTGGTCGCG CGCATCCACG CCATCGTCCG CCGCTCCAAG
GGCCACGCTC AGTCGGTGAT CCAGACCGGC GATCTCGTCG TCAATCTCGA CACCAAGACC
GTCGAAGTCG GCGGCCAGCG CGTGCATCTG ACCGGCAAGG AATATCAGAT GCTGGAACTG
CTCTCCCTGC GGAAGGGCAC CACGCTGACG AAGGAAATGT TCCTCAACCA CCTCTACGGT
GGCATGGACG AGCCGGAACT GAAGATCATC GACGTCTTCA TCTGCAAGCT GCGCAAGAAG
CTCGCCAACG CCTCCGACGG CCGCAATTTC ATCGAGACGG TGTGGGGCCG CGGTTACGTG
CTCCGCGAGC CGTCCGAGGA CGACGTCCGC ATCCCGGCCT GA
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| Protein sequence | MRVLLIEDDS ATAQSIELML KSESFNVYTT DLGEEGVDLG KLYDYDIILL DLNLPDMSGY
DVLKQLRVSK IKTPILILSG LAGIEDKVKG LGVGADDYMT KPFHKDELVA RIHAIVRRSK
GHAQSVIQTG DLVVNLDTKT VEVGGQRVHL TGKEYQMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LANASDGRNF IETVWGRGYV LREPSEDDVR IPA
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