Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1817 |
Symbol | |
ID | 6409475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1950824 |
End bp | 1953637 |
Gene Length | 2814 bp |
Protein Length | 937 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711704 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_001990818 |
Protein GI | 192290213 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGATC TTCTTCGTGA GTTTTTGACG GAGACCTTCG AGAGCCTGGA CACGGTTGAC AACCAGTTGG TCCGGTTTGA GCAGGAGCCG AACAACGCGA AGATATTGGA CAATATTTTT CGTCTTGTTC ACACCATCAA GGGAACGTGC GGGTTTCTAG GGTTGCCGCG GCTTGAAGCG CTTGCGCACG CGGCCGAGAC CCTGATGGGC AAATTCCGGG ACGGGATGCC GGTGACGGGG GAGGCGGTGA CGCTGATCCT GACCACGATC GACCGGATCA AGGACATTCT GACCCAGCTG GAGGCGACCC AGGCCGAGCC CGAGGGCGAG GACGGCGACC TGATCGGGGA GCTGGAGCGG CTGTCGATGC GCTCGCCGGA GGAGATCGCA GCCGAACTCG GCGGCGCTGC GCCGGTGGAG GTTGCCGAAG TCGAAGCCCC TGCCGAAGCT GTGGTGGCCG AGGCGGCCGA CGCCAATTCG ACCGAAGGCA CCCTGGTGGC GCAGACGCTG GAGCGTCCGC TGCGGCCGGG TGAAGTGTCG CTGGACGAAT TGGAGCGCGC CTTCCGCGAG ACCGAGATCG AGATGGCCTC GCCGCCGCTG CAGCCGGCCG TGAGCGAAGC TCCGGCTGCT GTGGCCGAAG CCGCGCCGCC TGAACCGAAG CCGGCCAAGC CCGCCAAACC CGCCGCCAAG CCGGCGGCGA AGAAGTCCGG CGGCGAAGGC GAGGGCGCAG CGGAAGGTGG CGCCGCTGGC GGCGTCGCCA ACCAGTCGAT CCGCGTCAAC GTCGACACCC TCGAACACCT GATGACGATG GTGTCGGAGC TGGTGCTGAC CCGTAACCAG CTGCTCGAGA TCAGCCGCCG CCACGAGGAC AACGAGTTCA AGGTGCCGCT GCAGCGGCTC TCCACCGTCA CCGCCGAGCT GCAGGACGGG GTGATGAAGA CCCGGATGCA GCCGATCGGC AACGCCTGGC AGAAGCTGCC GCGGATCGTG CGCGATCTGG CCGCCGAACT CGGCAAGCAG ATCGAGCTGG AGATGCACGG TGCCGACACC GAGCTCGACC GCCAGGTGCT GGACCTGATC AAGGATCCGC TCACCCATAT GGTGCGCAAC TCCGCCGACC ACGGGCTGGA GAAGCCCGAG GACCGGGCGC GCGCCGGCAA GCCCGAGCAG GGCACCATCC GCCTGTCCGC CTATCACGAG GGCGGCCACA TCGTGATCTG CATCGCCGAC AACGGCCGCG GGCTGGACAC CGAGCGGATC AAGGCCAAGG CCTTGGCCAA CGGGCTGGTC ACCGAGGCCG AACTCGAGAA GATGACCGAG GCGCAGATCC ACAAGTTCAT CTTCGCGCCG GGCTTCTCGA CCGCCGCCGC CGTCACCTCG GTGTCCGGCC GCGGCGTCGG CATGGACGTG GTGCGCACCA ATATCGACCA GATCGGCGGC ACCATCGAGG TGAAGTCGGT TGCCGGCGAA GGCTCGGCCA TCACCATCAA GATCCCGCTG ACCCTGGCGA TCGTCTCGGC GCTGATCGTC GAAGCCGGCG GTGACCGCTT CGCGATCCCG CAGCTTGCGG TGGTCGAACT GGTGCGGGCG CGGGCCAACT CCGAGCACCG CATCGAGCGG ATCAAGGATA CGCCGGTCCT CAGACTGCGC GACAAGCTGC TGCCGCTGAT CCATCTGAAG AAGCTGCTCG GCATCGACGA GGGCGCCAAC AGCGAGCCGG AGAACGGCTT CATCGTGGTG ACCCAGGTCG GCAGCCAGAC CTTCGGCATC GTGGTCGACG GCGTGTTCCA CACCGAAGAA ATCGTCGTCA AGCCGATGTC GACCAAGCTG CGTCACATCG GAATGTTCTC GGGCAACACC ATCCTGGGCG ACGGCGCGGT GATCATGATC GTCGATCCGA ACGGGATCGC GCAGGCGCTC GGCACCGCGG TGTCGGCGCA GCACGATATC TCCGACCAGG CGGCGGCGAG CCGCAATGCC TCGGCCGAAC AGCTCACCTC GCTGCTGGTG TTCCGCGCCG GCTCGAGCCA GCCGAAGGCG GTGCCGCTGT CGCTGGTGAC GCGCCTGGAA GAGATCGCCT CCGACAAGAT CGAGATGTCG AACGGCCGCT ACATGGTGCA GTACCGCGAC CAGCTGATGC CGCTCGTGCT GATGGAAGGC GTCGAGGTGG CCACCAGCGG CGTGCAGCCG ATCCTGGTGT TCGCCGACGA GGACCGGTCG ATGGGCCTTG TGGTCGACGA GATCGTCGAC ATCGTCGAGG AGCATCTGCA CATCCAGGTC GGCTCCAGCC GCGAGGGCAT TCTCGGCTCG GCGGTGATCA AGGGCCAGGC CACCGAGGTG ATCGACGTCG CGCACTTCCT GCCGATGGCG TTCTCCGACT GGCTGGCGCG CAAGGAGATG AAGCAGTCGC TGACCACCCG CTCGGTGCTG CTGGTCGATG ACTCGGCGTT CTTCCGCAAC ATGCTGGGTC CGGTGCTGAA GGCGGCGGGC TACAAGGTGC GGGTCGCGAC CTCGGCGGTC GAGGGCCTGT CGGTGCTGCG CTCGGGTGCG CAGTTCGACG TGATCCTGAC CGACATCGAG ATGCCGGAGA TGAACGGCTT CGAGTTCGCC GAGGCGATCC GCTCCGACAC GAAGATGTCG AACCTGCCGG TGATCGCGCT GAGTTCGCTG GTGTCGCCGG CGGCGATCGA GCGCGGCCGC CAGGCCGGTC TGACCGACTA CATCGCCAAG TTCGATCGGC CCGGCCTGAT CGCGGCGCTG AAGGAGCAGA CCACGATGCA TGCGACGCCC GAAGTGCTGG AGCAGGCGGC ATGA
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Protein sequence | MDDLLREFLT ETFESLDTVD NQLVRFEQEP NNAKILDNIF RLVHTIKGTC GFLGLPRLEA LAHAAETLMG KFRDGMPVTG EAVTLILTTI DRIKDILTQL EATQAEPEGE DGDLIGELER LSMRSPEEIA AELGGAAPVE VAEVEAPAEA VVAEAADANS TEGTLVAQTL ERPLRPGEVS LDELERAFRE TEIEMASPPL QPAVSEAPAA VAEAAPPEPK PAKPAKPAAK PAAKKSGGEG EGAAEGGAAG GVANQSIRVN VDTLEHLMTM VSELVLTRNQ LLEISRRHED NEFKVPLQRL STVTAELQDG VMKTRMQPIG NAWQKLPRIV RDLAAELGKQ IELEMHGADT ELDRQVLDLI KDPLTHMVRN SADHGLEKPE DRARAGKPEQ GTIRLSAYHE GGHIVICIAD NGRGLDTERI KAKALANGLV TEAELEKMTE AQIHKFIFAP GFSTAAAVTS VSGRGVGMDV VRTNIDQIGG TIEVKSVAGE GSAITIKIPL TLAIVSALIV EAGGDRFAIP QLAVVELVRA RANSEHRIER IKDTPVLRLR DKLLPLIHLK KLLGIDEGAN SEPENGFIVV TQVGSQTFGI VVDGVFHTEE IVVKPMSTKL RHIGMFSGNT ILGDGAVIMI VDPNGIAQAL GTAVSAQHDI SDQAAASRNA SAEQLTSLLV FRAGSSQPKA VPLSLVTRLE EIASDKIEMS NGRYMVQYRD QLMPLVLMEG VEVATSGVQP ILVFADEDRS MGLVVDEIVD IVEEHLHIQV GSSREGILGS AVIKGQATEV IDVAHFLPMA FSDWLARKEM KQSLTTRSVL LVDDSAFFRN MLGPVLKAAG YKVRVATSAV EGLSVLRSGA QFDVILTDIE MPEMNGFEFA EAIRSDTKMS NLPVIALSSL VSPAAIERGR QAGLTDYIAK FDRPGLIAAL KEQTTMHATP EVLEQAA
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