Gene Rpal_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1816 
Symbol 
ID6409474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1949977 
End bp1950633 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content63% 
IMG OID642711703 
Producthypothetical protein 
Protein accessionYP_001990817 
Protein GI192290212 
COG category[S] Function unknown 
COG ID[COG5385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.891001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACA CCCAATCTCC CGCTGTGCAG GCTCCCGCTC CCGATGCGCT GGAGTTGGCG 
GCGCTGCTAT GTTCGCGGGT GTGCCACGAT CTCATCAGCC CGGTCGGTGC GATCGTCAAT 
GGCCTGGAAG TGCTCGACGA CAGCTCCAAG CAGGAAGACC GCGATTTCGC GCTCGAATTA 
ATTCGAAAGA GTGCCAAAAC CGCATCGGCA CGCCTGCAGT TCTGCCGCCT GGCGTTCGGC 
GCGGCGGGCT CGGCTGGTGC CCAGATCGAT CTCGGTGACG CGCAGAACAT GGCGCGCGGT 
CACCTCGAAG ACGACAAGAC CAAGCTGACC TGGAATCTGC CGCGGCTGCT GCTCGCCAAG 
AACCGGGTCA AGCTGCTGCT CAACATGCTG GTGATTGCAC AACAGACGAT TCCGCGCGGT 
GGTACGCTGA CGATCGACCC GATCGGAGAA GGCGACAATT TGTCCTTCCG CATCGTTGCA 
GCCGGTATCA ACGCCCGCAC GCCGCACAAC ATCGTCGATC TGCTCAACGG GACTCAGAGC 
GGTCCGATCG AGTCGCACGG CGTGCAGCCG TACTACACGC GACTGCTCGC GCAGGCCTGC 
GGACTGACCG TTTCACTCGC CCCGGAAGGC GACACCATGG TGGTAACTGC GTCCTGA
 
Protein sequence
MSDTQSPAVQ APAPDALELA ALLCSRVCHD LISPVGAIVN GLEVLDDSSK QEDRDFALEL 
IRKSAKTASA RLQFCRLAFG AAGSAGAQID LGDAQNMARG HLEDDKTKLT WNLPRLLLAK 
NRVKLLLNML VIAQQTIPRG GTLTIDPIGE GDNLSFRIVA AGINARTPHN IVDLLNGTQS 
GPIESHGVQP YYTRLLAQAC GLTVSLAPEG DTMVVTAS