| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1801 |
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| Symbol | |
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| ID | 6409458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1934649 |
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| End bp | 1935743 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711688 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001990803 |
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| Protein GI | 192290198 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.367345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCCGC TCGAAGGACT GACCGTCATC GCCGTCGAAC AGGCGGTCGC CGCGCCGTAT
TGCAGCTCGC GGCTCGCCGA TGCCGGCGCC CACGTCATCA AGATCGAACG CCCCGAAGGC
GATTTCGCCC GCGGCTACGA CGCCGCCGCC AAGGGCCAGA GCAGCTACTT CGTCTGGCTC
AACCGCGGCA AGGAATCCGC GGTGGTCGAC CTCGCCACCA AGGAAGGCCG CGCCGAGCTG
GAAAAGCTGA TCGCCTCGGC CGACGTGCTG CTGCAGAACC TCAAGCCCGG CTCGATGGAC
AAGCTCGGCT TTGCCCGCGA GCGGCTGCGC AAGGACTATC CGAAGCTGAT CATCTGCACG
ATCTCCGGTT ACGGCGACGA GGGCCCCTAC GCCCATCGCA AGGCCTATGA CCTGTTGATC
CAGGCGGAAA GCGGCCTCGC CTCGATCACC GGCGGCCCGG AAAGCGCCTC CCGCGTCGGC
ATGTCGATCG TCGACGTCGC CACGGGCGCC ACCGCCCATG CGGCGATCCT CGAAGCGCTG
ATCGGCCGCG GCCGTACCGG CCAGGGCGCC GACATCCGGA TCTCGATGTT CGACGTGATG
GCCGACTGGC TGACCGTGCC GCTGCTCAAC GCCGAGGCCG GCAATCCGCC CAAGCGTCTC
GGCCTCGCCC ATCCGTCGAT CGCGCCGTAT GGCGTGTTCA CTTCGAAGGA CGGCAAGGAC
ATCCTGATCT CGATCCAGAG CGAGCGCGAG TGGAAGAAGC TGTGCTCGGA CGTGCTGCGC
CAGCCTGACC TGCCGAACGA TCCGCGGCTG TGCAACGGCG TCGAGCGGGT GAAGAACCGC
GAATACACCG ACAAGATCGT GGCCGACATC TTCGCCTCGC TGACCCGCGA CGATCTGCTC
GAACATCTGG CCGCCGCCGA CATTGCGTTC GCCGAAGTCA ACGCGATGGA AGACCTGTCG
CACCATCCGC ATCTGCGCCG GATCGAAGTC GACACGCCGA ACGGCAAAGT CAGCTATCCG
GCGCCGGCGG CGATCTTCGT CGGCGACGAG CGCCGCTACG GCGCGGTGCC GGGCATCGGC
GACAAGCGCA AGTAA
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| Protein sequence | MLPLEGLTVI AVEQAVAAPY CSSRLADAGA HVIKIERPEG DFARGYDAAA KGQSSYFVWL
NRGKESAVVD LATKEGRAEL EKLIASADVL LQNLKPGSMD KLGFARERLR KDYPKLIICT
ISGYGDEGPY AHRKAYDLLI QAESGLASIT GGPESASRVG MSIVDVATGA TAHAAILEAL
IGRGRTGQGA DIRISMFDVM ADWLTVPLLN AEAGNPPKRL GLAHPSIAPY GVFTSKDGKD
ILISIQSERE WKKLCSDVLR QPDLPNDPRL CNGVERVKNR EYTDKIVADI FASLTRDDLL
EHLAAADIAF AEVNAMEDLS HHPHLRRIEV DTPNGKVSYP APAAIFVGDE RRYGAVPGIG
DKRK
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