| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1799 |
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| Symbol | |
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| ID | 6409456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1931883 |
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| End bp | 1933511 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642711686 |
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| Product | benzoylformate decarboxylase |
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| Protein accession | YP_001990801 |
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| Protein GI | 192290196 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.42222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCGCGA AGAAGTCCAA ACAGCCGAGC GCTGCTGTCA GCACCGTCAA ATCCGCCACC
CTCGATCTGC TCCGCGCCTT CAAGATCGAC AAGGTGTTCG GCAATCCCGG CTCGACCGAG
CTGCCGTTCC TCAGTGACTG GCCGGACGAT ATCGACTACG TGCTGGCGCT GCAGGAAGCT
TCGGCGGTGG CGATGGCCGA CGGCTACGCG CAGGCGACGC GCAACGCCGG CTTCGTCAAT
CTGCATTCGG CCGCCGGCGT CGGCAATGCG CTCGGCAACA TTTACAGCGC GTTCAAGAAC
CAGACGCCGC TGGTAATCAC CGCCGGCCAG CAAGCGCGCA GCCTGCTGCC GCTGCAGGCA
TTCCTGGGCG CCGAGCGCGC CTCCGAGTTT CCGCGGCCTT ATGTGAAGTA CAGCGTCGAG
CCGGCCCGCG CCGAGGACGT GCCCACCGCG ATTGCCCGTG CCTACTACGT CGCGATGCAG
CCGCCGTGCG GGCCGACCTT CGTGTCGGTA CCGATTGACG ATTGGGCGCG GCCGGCGGCG
CCGGTGCCAC CGCGCACGAT CACCCGCGAG ATCGGCCCGG ATCGATCAGC AATGCAGGTG
CTGGCCGATA CGCTCGCCAA CGCCAAGAAG CCGGCACTGG TGGTCGGGCC AGCGATCGAC
CGCGCCGCGG CGGTCGATCT GATGGTGCAG CTCGCCGAGC GCACGCGAGC GCCAGTGTGG
GTGTCGCCGT TCTCCGCACG CTGCAGCTTC CCGGAACAGC ATCTGCTGTT CGCCGGCTTC
CTGCCCGCCT CGCCGGGACA ACTCTCCGAA ACGCTCGGCG CCTACGACGT GATCGTGGTG
ATCGGCGCGC CGGTGTTCAC CTTTCATGTC GAAGGCCACG CCGCGATCTT CGATGGAAGC
TCGAAGCTGT TCCAGATCAC CGATGATGCC GAAGCCGCCT CGGTGACGCC GCTCGGCGCC
AGCATCATCG CGACGATGAC CCCGGCCCTG ACGCTGCTGC TGGAGTTGCT GCCGGAGACC
AAGCGCGCCG CACCGCCGGC CCGCGCGGTG CCGCCTGCAC CTCAGCCGGC CGAGCCGATG
CCGGTGGAGT ATCTGCTGCA CACCCTGCGC GCCGCGATGC CCCAGAGCGC GATGCTGGTC
GAGGAAGCGC CGTCGCACCG CCCGGCGATG CAGACATACA TGCCGATGCC GGGCCAGGAC
AGTTTCGCCA CGATGGCGAG CGGCGGCTTG GGCTGGTCGC TGCCGGCGTC GGTCGGTTTT
GCGCTGGCGC ATCCGAACCG CCGCACCGTC TGCCTGATCG GCGACGGCTC GGCGATGTAC
TCGATCCAGG CGCTGTGGAC GGCGGCGCAG CGCAAGCTGC CGCTGACCGT GGTGGTGCTG
AACAACGGCG GCTACGGCGC GATGCGCTCG TTCAGCCAGG TGATGCAGGT GCGGAACGTG
CCCGGGCTGG AGCTGCCCGG GATCGACTTC ACCGCTCTGG CGCAATCGCT CGGCTGCGAT
GCTGTGCGGG TGACGCGCAG CGAGGAACTG GCGCCGGCGC TGACGCGCGC CCTTGCATGG
GACGGCGTCA GCCTGGTCGA AGCGATGCTC GATACGTCGG TGCCGATGCT CTACGCGCGC
AACGGCTGA
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| Protein sequence | MPAKKSKQPS AAVSTVKSAT LDLLRAFKID KVFGNPGSTE LPFLSDWPDD IDYVLALQEA
SAVAMADGYA QATRNAGFVN LHSAAGVGNA LGNIYSAFKN QTPLVITAGQ QARSLLPLQA
FLGAERASEF PRPYVKYSVE PARAEDVPTA IARAYYVAMQ PPCGPTFVSV PIDDWARPAA
PVPPRTITRE IGPDRSAMQV LADTLANAKK PALVVGPAID RAAAVDLMVQ LAERTRAPVW
VSPFSARCSF PEQHLLFAGF LPASPGQLSE TLGAYDVIVV IGAPVFTFHV EGHAAIFDGS
SKLFQITDDA EAASVTPLGA SIIATMTPAL TLLLELLPET KRAAPPARAV PPAPQPAEPM
PVEYLLHTLR AAMPQSAMLV EEAPSHRPAM QTYMPMPGQD SFATMASGGL GWSLPASVGF
ALAHPNRRTV CLIGDGSAMY SIQALWTAAQ RKLPLTVVVL NNGGYGAMRS FSQVMQVRNV
PGLELPGIDF TALAQSLGCD AVRVTRSEEL APALTRALAW DGVSLVEAML DTSVPMLYAR
NG
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