| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1797 |
|---|
| Symbol | |
|---|
| ID | 6409454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1929990 |
|---|
| End bp | 1930532 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642711684 |
|---|
| Product | Appr-1-p processing domain protein |
|---|
| Protein accession | YP_001990799 |
|---|
| Protein GI | 192290194 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.676321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGAGCCTCT TCTCCCGCCA GATCGGCACG GCGACCTGTG AGGTCGTCGT CGCCGACATC
ACCACGCTGG CCGTCGACGC GATCGTCAAC GCCGCCAATT CGTCTTTGCT TGGCGGCGGC
GGCGTCGATG GCGCGATCCA TCGTGCAGCC GGTCCTGAGC TGCTCGCCGA GTGTGAAACG
CTCGGCGGCT GCGAAACCGG CGATGCCAAG ATTACCCGCG GCTACCGTTT GCCCGCGCGC
CATGTGATCC ACGCCGTCGG CCCGATTTGG CACGGCGGCG GCCATGGCGA AGACGCGGCA
CTCGCCTCCT GCTACGCCCG CGCCCTGCAG CTCGCGAACG AGCATGAGCT GAGCTCGATC
GCGTTCTCGG CGATCTCGAC CGGCGTTTAC GGTTTCCCGC CCGAACGCGC GGCGCCGATT
GCGGTTCGAA CCACCCTCGA TGCGCTGCGC TCCGCCACTT CGGTCACCCG AGCGGTGTTC
TGTTGCTTCT CGCCCGCGAG TGCCGAGTTG CACCGGGTCG CGCTTGCGGA TGCGGCCCCT
TGA
|
|---|
| Protein sequence | MSLFSRQIGT ATCEVVVADI TTLAVDAIVN AANSSLLGGG GVDGAIHRAA GPELLAECET
LGGCETGDAK ITRGYRLPAR HVIHAVGPIW HGGGHGEDAA LASCYARALQ LANEHELSSI
AFSAISTGVY GFPPERAAPI AVRTTLDALR SATSVTRAVF CCFSPASAEL HRVALADAAP
|
|---|
| |