Gene Rpal_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1790 
Symbol 
ID6409447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1923694 
End bp1924218 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content64% 
IMG OID642711677 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001990792 
Protein GI192290187 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCCG AAACGAACAA CGCCGACGAC GAGCCGATCG GCACCGCCAC CGACATCAAT 
CATGCCGATC GTCTGTTGCA TCGTCTGGTC TGGGACGTAT CAGCCATCAG TTTCTCGATC
CTGCGGATGG CCGAACTGCT CGGGCGCCGA GTCGGCCTGA CGGGATCGCA ATGGCTGCTG
ATCAAGGCGG TCGACTTTCT GGCCGACCGG GACGGCGTTC CAGTCGGCGA AGTCGCGGCG
CTGCTCAATA TGAAAGGATC GTTCGTCTCT GCGCAGATCC GGCCGCTGGA GCAGCGCGGC
CTCCTCAACC GCACTCAATC GGCAGAGGAT CGGCGGGTTA TTCTGCTGTC GCTGACCGGG
AGCGCGAAAC AGACGCTGAC GCGGGTCGAG GACGAGATGT GCAGCATCGA AGAGATCACG
CGCGGCACGC TGGTCGATCG GCACGTCGGA GAATTGTCCG ACAGCGTCAA CGCAATGCGC
CGGCGCATGG ATCGCGCAAC CGCGCGCGTT GCGCGGCTCG ACTAG
 
Protein sequence
MTPETNNADD EPIGTATDIN HADRLLHRLV WDVSAISFSI LRMAELLGRR VGLTGSQWLL 
IKAVDFLADR DGVPVGEVAA LLNMKGSFVS AQIRPLEQRG LLNRTQSAED RRVILLSLTG
SAKQTLTRVE DEMCSIEEIT RGTLVDRHVG ELSDSVNAMR RRMDRATARV ARLD