Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1790 |
Symbol | |
ID | 6409447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1923694 |
End bp | 1924218 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642711677 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001990792 |
Protein GI | 192290187 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCCG AAACGAACAA CGCCGACGAC GAGCCGATCG GCACCGCCAC CGACATCAAT CATGCCGATC GTCTGTTGCA TCGTCTGGTC TGGGACGTAT CAGCCATCAG TTTCTCGATC CTGCGGATGG CCGAACTGCT CGGGCGCCGA GTCGGCCTGA CGGGATCGCA ATGGCTGCTG ATCAAGGCGG TCGACTTTCT GGCCGACCGG GACGGCGTTC CAGTCGGCGA AGTCGCGGCG CTGCTCAATA TGAAAGGATC GTTCGTCTCT GCGCAGATCC GGCCGCTGGA GCAGCGCGGC CTCCTCAACC GCACTCAATC GGCAGAGGAT CGGCGGGTTA TTCTGCTGTC GCTGACCGGG AGCGCGAAAC AGACGCTGAC GCGGGTCGAG GACGAGATGT GCAGCATCGA AGAGATCACG CGCGGCACGC TGGTCGATCG GCACGTCGGA GAATTGTCCG ACAGCGTCAA CGCAATGCGC CGGCGCATGG ATCGCGCAAC CGCGCGCGTT GCGCGGCTCG ACTAG
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Protein sequence | MTPETNNADD EPIGTATDIN HADRLLHRLV WDVSAISFSI LRMAELLGRR VGLTGSQWLL IKAVDFLADR DGVPVGEVAA LLNMKGSFVS AQIRPLEQRG LLNRTQSAED RRVILLSLTG SAKQTLTRVE DEMCSIEEIT RGTLVDRHVG ELSDSVNAMR RRMDRATARV ARLD
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