Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1788 |
Symbol | |
ID | 6409445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1922858 |
End bp | 1923220 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642711675 |
Product | protein of unknown function DUF427 |
Protein accession | YP_001990790 |
Protein GI | 192290185 |
COG category | [S] Function unknown |
COG ID | [COG2343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTCC CAGGCCCCGA TCACCCGATC TCGATCACGG CCAATCCGAA CGGCGTCCGG ATCCGCGCGG ACGGCAAGGT GATCGCCGAG ACCCGCCGGG CGCTGACGCT GCAGGAGGCG AGCTACCCGC CGGTGCAGTA CATTCCCCGG GAAGACGCCG ACATGCGGCT GCTGGAAAAA ACCGCACGTG TCACTCATTG CCCGTACAAG GGCGATGCCA GCTATTTCAG TATCGTCGCC GGGGGCGAAC CGCAGGCCAA CGCGGTCTGG AGCTACGAGA ATCCATTTCC GGCTATGGCG GAGATCGCCG GTTATCTGGC ATTCTATCCG CAAAAAGTTC AAATCGAAGA ATTCAAACCC TAG
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Protein sequence | MKLPGPDHPI SITANPNGVR IRADGKVIAE TRRALTLQEA SYPPVQYIPR EDADMRLLEK TARVTHCPYK GDASYFSIVA GGEPQANAVW SYENPFPAMA EIAGYLAFYP QKVQIEEFKP
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