| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1786 |
|---|
| Symbol | |
|---|
| ID | 6409443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1919146 |
|---|
| End bp | 1921356 |
|---|
| Gene Length | 2211 bp |
|---|
| Protein Length | 736 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642711673 |
|---|
| Product | phosphoribosylformylglycinamidine synthase II |
|---|
| Protein accession | YP_001990788 |
|---|
| Protein GI | 192290183 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
|---|
| TIGRFAM ID | [TIGR01736] phosphoribosylformylglycinamidine synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC CCGAGCCGAA GATCACCCCG GAACTGATCG CCAGCCATGG CCTCAAGCCG
GATGAATATC AGCGCATTCT CGATCTGATC GGGCGCGAGC CGACTTTCAC CGAGCTCGGC
ATCTTCTCGG CGATGTGGAA CGAGCACTGC TCGTACAAGT CGTCGCGCAT TCATCTGAAA
GGGCTGCCCA CCAAGGCGCC GTGGGTGCTG CAGGGGCCGG GCGAGAACGC CGGCGTGATC
GACATCGGCG ACAATCAGGC GGTGGTCTTC AAGATGGAGA GCCACAACCA CCCGAGCTAC
ATCGAGCCGT ATCAGGGGGC GACCACCGGC GTCGGCGGCA TCCTGCGCGA CGTCTTCACC
ATGGGGGCGC GCCCGATCGC CTGCCTCAAC GCGCTGAGCT TCGGCGACCC GAGCCATCCC
AAGACCCGGC ACCTGGTGTC CGGCGTGGTC GCCGGCGTCG GCGGCTACGG CAATTCGTTC
GGCGTGCCGA CCGTCGGCGG CCAGACCCGG TTCCACACCC GCTATGACGG CAACATCCTA
GTCAACGCGA TGGCAGTCGG CCTTGCGGAC GCCGACAAGA TCTTCCTCGC CGCGGCGTCT
GGCGTCGGCA TGCCGATCGT CTATCTCGGC TCCAAGACCG GCCGCGACGG CATGGGCGGC
GCCACCATGG CGTCGGCCGA GTTCGACGAG GGCTCGGATG AGAAGCGCCC GACCGTGCAG
GTCGGCGACC CCTTCGCCGA GAAGCTGCTG CTTGAGGCCT GCCTCGAGAT CATGGCCAAG
GACTGCGTGA TCGCGATCCA GGACATGGGC GCGGCCGGCC TGACCTGCTC GGCGGTCGAG
ATGGGCGCCA AGGGCGACCT CGGCGTCGAG CTCGATCTCG ATGCGGTGCC GACTCGCGAG
ACCGGCATGA CCGCTTACGA GATGATGCTC TCCGAAAGCC AGGAGCGCAT GCTCATGGTG
CTGAAGCCGG AGAAGGAAAA GGAAGCCGAA GAGATCTTCA AGAAGTGGGG GCTCGACTTC
GCGATCGTCG GCTACACCAC GCCGACCAAG CGCTTCGTGG TCAAGCATGG CGGGCAGGTG
AAGGCCGATC TGCCGATCAA GGAGCTCGGC GACGAGGCGC CGCTCTACGA TCGCCCCTGG
GTCGAGAGCC CGAAGCTGCC GGTGATCCAC GCCCGCGACA TCAACGCGCC GATGGGCGCG
GCCGAGGCGC TTGAGAAGCT GCTGGCGACG CCGGACCTGT GCAGCAAGCG ATGGGTCTGG
GAGCAGTACG ACCACGTCAT CGGCGGCAAC ACCGTGCAGC GTCCCGGTGG CGACGCCGCG
GTGGTGCGTA TCGAGGACGG CCCGAAGGGC CTCGCGCTCA CCGTCGACGT CACGCCGCGC
TACTGCGAGG CCGATCCGTT CGAGGGCGGC AAGCAGGCGG TGGCGGAAGC CTATCGCAAC
ATCACCGCGG TCGGCGGCAA GCCGCTGGCG ATCACCGACA ACTTGAACTT CGGCAATCCC
GAGCGGCCCG AGATCATGGG CCAACTCGTC GGCTGCCTGA AGGGCATCTC GGAAGCCTGC
ATCGCGCTCG ACTCGCCGAT CGTCTCGGGC AACGTCTCGC TCTACAACGA GACCTCGGGC
CGCGGCATCC TGCCGACCCC GTCGATCGGC GGCGTCGGCG TGCTCGATGA CTTCACCAAG
TCGGCCACGC TCGCGTTCAA GGCCGAAGGC GAGGCGATCC TGCTGATCGG TGAGACCAAG
GGCTGGCTCG GCCAGTCGGT GTACTTGCGC GAGATCTGCG GCCGTGAAGA AGGCGCGCCG
CCGCCGGTCG ATCTTGCGGT CGAGAAGCGC CACGGCGACG TCGTCCGCGG CATGATCCAC
GCCGGCACCG CGACCGCCGT GCACGATGTG TCAGATGGCG GCCTGCTGGT TGCGATCGCC
GAGATGGCGA TCGCCGGCAA CATCGGCGCC TCGCTCGACG CGCCTCCCGG CGAGACCGTG
TCGCACGCCT GGTGGTTCGG TGAAGATCAG GCCCGCTACG TCGTCACGGT GAAGGAAGCC
GATCTGCTCG CGGTGAAGAC CAAGCTGAAG ACGATCGGCG TGCCTTGCAC CCAGATCGGC
GTCACCGGCG GCCACGCGCT GAAGATCGAA GGTGAACGCA CCGTCGACCT CAAGGCCCTG
CGCCACGCCC ACGAGCATTG GCTGCCGGAC TACATGGGCG GGAAGAACTA A
|
|---|
| Protein sequence | MSAPEPKITP ELIASHGLKP DEYQRILDLI GREPTFTELG IFSAMWNEHC SYKSSRIHLK
GLPTKAPWVL QGPGENAGVI DIGDNQAVVF KMESHNHPSY IEPYQGATTG VGGILRDVFT
MGARPIACLN ALSFGDPSHP KTRHLVSGVV AGVGGYGNSF GVPTVGGQTR FHTRYDGNIL
VNAMAVGLAD ADKIFLAAAS GVGMPIVYLG SKTGRDGMGG ATMASAEFDE GSDEKRPTVQ
VGDPFAEKLL LEACLEIMAK DCVIAIQDMG AAGLTCSAVE MGAKGDLGVE LDLDAVPTRE
TGMTAYEMML SESQERMLMV LKPEKEKEAE EIFKKWGLDF AIVGYTTPTK RFVVKHGGQV
KADLPIKELG DEAPLYDRPW VESPKLPVIH ARDINAPMGA AEALEKLLAT PDLCSKRWVW
EQYDHVIGGN TVQRPGGDAA VVRIEDGPKG LALTVDVTPR YCEADPFEGG KQAVAEAYRN
ITAVGGKPLA ITDNLNFGNP ERPEIMGQLV GCLKGISEAC IALDSPIVSG NVSLYNETSG
RGILPTPSIG GVGVLDDFTK SATLAFKAEG EAILLIGETK GWLGQSVYLR EICGREEGAP
PPVDLAVEKR HGDVVRGMIH AGTATAVHDV SDGGLLVAIA EMAIAGNIGA SLDAPPGETV
SHAWWFGEDQ ARYVVTVKEA DLLAVKTKLK TIGVPCTQIG VTGGHALKIE GERTVDLKAL
RHAHEHWLPD YMGGKN
|
|---|
| |