Gene Rpal_1778 details

Gene Information

• Locus tag: Rpal_1778
• ID: 6409435
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 1912588
• End bp: 1913364
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 642711666
• Product: hypothetical protein
• Protein accession: YP_001990781
• Protein GI: 192290176

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGGGCA GAACACGCCG GATCTCGGCC CCACGCAGGT TGATTGCGGA TCTGATGCAC 
GCCTCGCAGG CCGTGCCGCT GATCAGCTAT CGGCGCACGT TGCATCTCGG CCCGCTGGCG 
CGGGCCCGGG CCGCCGCCGC ATCGCCGCCA GGCTTCGCCG CGATCTTCGC CAAGGCGTTC 
AGCCTGGTGG CGCGCGACGA GCCGCTGTTG CGCACGCTGT ATGTCGACTT CCCGTGGCCG 
CATTTCTTCG AGCTACCGAA GAGCGTCGGG ATGATCGCCG TCGCACGCCG CATCGACGGC 
GAAGACTGCG TGCTGATGCA GAAGGTGACC GCCGCCGACA CGCTGCCGCT CACCGAGGTC 
GACGCGATCA TTCGCGGTGC CAGCACCGCA CCGATCGAGA CCGTGCCGAT GTTCCGCAAG 
CTGCTGCGGA TCAGCCGGAT GCCGTGGCCG CTGCGGCGGA TCGCCTGGTG GGCCGGGATG 
TCGCTCGACC GGCCGCGGGC CAACTTCTTC GGCAGCTTCG GAGTCTCCTC GGTATCGGCG 
TTCGGCCCCG GCGACCTCTG TCCGGTCAGC CCCGGCCCCT ACATCCTCAG TTACGGCCGA 
CTCACCGACG ATGGCCGGCT GGAGGTGATC GTCCGGTTCG ACCACCGGGT GATCGACGCC 
GCCCCGATCG CGCGGCTGAC AACCCGGCTG GAACAGGTGC TGAACACCCT CATTGCGGCC 
GAGATCGAGG GTCTGGATCG CCCCGCCCGG GCGCTGCGGG CCGCAGCCGG GCCTTGA 

 

Protein sequence

MRGRTRRISA PRRLIADLMH ASQAVPLISY RRTLHLGPLA RARAAAASPP GFAAIFAKAF 
SLVARDEPLL RTLYVDFPWP HFFELPKSVG MIAVARRIDG EDCVLMQKVT AADTLPLTEV 
DAIIRGASTA PIETVPMFRK LLRISRMPWP LRRIAWWAGM SLDRPRANFF GSFGVSSVSA 
FGPGDLCPVS PGPYILSYGR LTDDGRLEVI VRFDHRVIDA APIARLTTRL EQVLNTLIAA 
EIEGLDRPAR ALRAAAGP