| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1773 |
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| Symbol | |
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| ID | 6409430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1908346 |
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| End bp | 1909041 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711661 |
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| Product | Hly-III family protein |
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| Protein accession | YP_001990776 |
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| Protein GI | 192290171 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCT TCCGCCTCAA GCAAATCGTG TCGCATGCCA GGATCGACGC CAAAGGCGCG
GTTCACTGGA ACTACGATCG CGCCGAGCTG ATCGCCGATG GCGTCGTGCA TGTGCTGGGC
CTCGTCGCCG GGTTGATCGC CGCCACCGCG CTGGTCACGC TGACCGGCGT GTTCGCATCC
ACGCCGACGA TCGTCTCGGT ATCGGTGTAT GTTGCAGGGC TGCTGGCGAT GCTCGGCCTG
TCGGCCGCGT ACAATCTCTG GCCGGTGTCG CCGCGCAAAT GGCTGCTGCG GCGGTTCGAC
CATTCGGCGA TCTACATTCT GATCGCCGCA ACGTACACAC CGATCATCAG CCAGATCAAG
GATCAGGTGT TCGGTCTGGC GCTGCTCGCC GGCGTCTGGG GCGTCGCGGT GGTCGGCATC
GTGCTCAAGC TGTTCAAGCC CGGCAAATTC GACAAGCTGT CGGTCGGGCT TTACCTCGCG
CTCGGTTGGA GCGGCATCAT CGCCTACGAT CAGGTGGTCG AGACGCTGCC GACCACGGCG
ATGTGGTTCC TGGCGATCGG CGGCCTGCTG TACACACTCG GCGTGATCTT CCACGCTTGG
CGGCGGCTGC GGTTCCAGAA CGCGATCTGG CACGCCTTCG TGCTGGTCGC GGCCGGCTGC
CACTACGTCG CGGTGATGGA CCTGGTGCTG GCGTAG
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| Protein sequence | MTIFRLKQIV SHARIDAKGA VHWNYDRAEL IADGVVHVLG LVAGLIAATA LVTLTGVFAS
TPTIVSVSVY VAGLLAMLGL SAAYNLWPVS PRKWLLRRFD HSAIYILIAA TYTPIISQIK
DQVFGLALLA GVWGVAVVGI VLKLFKPGKF DKLSVGLYLA LGWSGIIAYD QVVETLPTTA
MWFLAIGGLL YTLGVIFHAW RRLRFQNAIW HAFVLVAAGC HYVAVMDLVL A
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