Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1761 |
Symbol | |
ID | 6409418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1893180 |
End bp | 1893794 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711649 |
Product | LemA family protein |
Protein accession | YP_001990764 |
Protein GI | 192290159 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.105862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGAAGT TTCTGACGGT GCTGGCGGCG CTCGCCGCGC TCAGCCTGAG CAATTGCGGC TACAACACCA TCCAGAGCGA AGACCAGGAG GTGAAGTCCA CCTGGTCGGA GGTGGTGAAC CAGTATCAGC GGCGTGCCGA TCTGGTGCCC AATCTCGTCA ACTCGGTGAA GGGCTTCGCC CAGCAGGAAA AGGACGTGCT GCTCGGCGTC ACCAACGCCC GCGCCAAGGT CGGCAGCATC CAGGCGACGC CCGAGGTGCT GAACGATCCG GCCGCGTTCC AGAAGTTCCA GCAGGCGCAG GGCGAACTGT CGAGCGCGCT GTCGCGGCTC TTGGTCGTCA CCGAGAACTA TCCGCAGCTC AAATCCGACG AGCTGTTCAA GAACCTGATG GCGCAGCTCG AAGGCACCGA GAACCGCATC ACCGTGGCGC GCAATCGCTA CATCAAGGCT GTAGCGGCCT ATAACGTCAC GGTGCGATCG GTGCCGACCA ACTTCACCGC GATGATGTTC GGCTACAAGG AAAAGCCGAA CTTCGCGGTG GAGAACGAGA AGGCGATCTC GACCGCGCCG AAGGTCGATT TCACCCCTGC GCCGGCTCCA GCCCCGGCCA AGTGA
|
Protein sequence | MRKFLTVLAA LAALSLSNCG YNTIQSEDQE VKSTWSEVVN QYQRRADLVP NLVNSVKGFA QQEKDVLLGV TNARAKVGSI QATPEVLNDP AAFQKFQQAQ GELSSALSRL LVVTENYPQL KSDELFKNLM AQLEGTENRI TVARNRYIKA VAAYNVTVRS VPTNFTAMMF GYKEKPNFAV ENEKAISTAP KVDFTPAPAP APAK
|
| |