Gene Rpal_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1761 
Symbol 
ID6409418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1893180 
End bp1893794 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID642711649 
ProductLemA family protein 
Protein accessionYP_001990764 
Protein GI192290159 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.105862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAGT TTCTGACGGT GCTGGCGGCG CTCGCCGCGC TCAGCCTGAG CAATTGCGGC 
TACAACACCA TCCAGAGCGA AGACCAGGAG GTGAAGTCCA CCTGGTCGGA GGTGGTGAAC
CAGTATCAGC GGCGTGCCGA TCTGGTGCCC AATCTCGTCA ACTCGGTGAA GGGCTTCGCC
CAGCAGGAAA AGGACGTGCT GCTCGGCGTC ACCAACGCCC GCGCCAAGGT CGGCAGCATC
CAGGCGACGC CCGAGGTGCT GAACGATCCG GCCGCGTTCC AGAAGTTCCA GCAGGCGCAG
GGCGAACTGT CGAGCGCGCT GTCGCGGCTC TTGGTCGTCA CCGAGAACTA TCCGCAGCTC
AAATCCGACG AGCTGTTCAA GAACCTGATG GCGCAGCTCG AAGGCACCGA GAACCGCATC
ACCGTGGCGC GCAATCGCTA CATCAAGGCT GTAGCGGCCT ATAACGTCAC GGTGCGATCG
GTGCCGACCA ACTTCACCGC GATGATGTTC GGCTACAAGG AAAAGCCGAA CTTCGCGGTG
GAGAACGAGA AGGCGATCTC GACCGCGCCG AAGGTCGATT TCACCCCTGC GCCGGCTCCA
GCCCCGGCCA AGTGA
 
Protein sequence
MRKFLTVLAA LAALSLSNCG YNTIQSEDQE VKSTWSEVVN QYQRRADLVP NLVNSVKGFA 
QQEKDVLLGV TNARAKVGSI QATPEVLNDP AAFQKFQQAQ GELSSALSRL LVVTENYPQL
KSDELFKNLM AQLEGTENRI TVARNRYIKA VAAYNVTVRS VPTNFTAMMF GYKEKPNFAV
ENEKAISTAP KVDFTPAPAP APAK